Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | ACMFG6_RS10805 | Genome accession | NZ_CP179699 |
| Coordinates | 2255633..2256013 (-) | Length | 126 a.a. |
| NCBI ID | WP_000836911.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain PR5 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2250633..2261013
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACMFG6_RS10775 (ACMFG6_10775) | tadA | 2250751..2251254 (-) | 504 | WP_000033178.1 | tRNA adenosine(34) deaminase TadA | - |
| ACMFG6_RS10780 (ACMFG6_10780) | - | 2251261..2252385 (-) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| ACMFG6_RS10785 (ACMFG6_10785) | ung | 2252382..2253095 (-) | 714 | WP_001177528.1 | uracil-DNA glycosylase | - |
| ACMFG6_RS10790 (ACMFG6_10790) | - | 2253146..2253742 (-) | 597 | WP_000908452.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| ACMFG6_RS10795 (ACMFG6_10795) | gspK | 2253973..2254932 (-) | 960 | WP_000301476.1 | type II secretion system minor pseudopilin GspK | - |
| ACMFG6_RS10800 (ACMFG6_10800) | xcpW | 2254932..2255633 (-) | 702 | WP_000594589.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| ACMFG6_RS10805 (ACMFG6_10805) | xcpV | 2255633..2256013 (-) | 381 | WP_000836911.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| ACMFG6_RS10810 (ACMFG6_10810) | - | 2256003..2256557 (-) | 555 | WP_000841373.1 | type II secretion system protein | - |
| ACMFG6_RS10815 (ACMFG6_10815) | - | 2256567..2257175 (-) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| ACMFG6_RS10820 (ACMFG6_10820) | - | 2257213..2257986 (-) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| ACMFG6_RS10825 (ACMFG6_10825) | - | 2258004..2258345 (-) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| ACMFG6_RS10830 (ACMFG6_10830) | - | 2258357..2259337 (-) | 981 | WP_001075411.1 | DNA polymerase III subunit delta' | - |
| ACMFG6_RS10835 (ACMFG6_10835) | kdsB | 2259349..2260110 (-) | 762 | WP_000680697.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13975.20 Da Isoelectric Point: 9.8004
>NTDB_id=1092596 ACMFG6_RS10805 WP_000836911.1 2255633..2256013(-) (xcpV) [Acinetobacter baumannii strain PR5]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=1092596 ACMFG6_RS10805 WP_000836911.1 2255633..2256013(-) (xcpV) [Acinetobacter baumannii strain PR5]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |