Detailed information NTG1092595

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: ACMFG6_RS10800
• Genome accession: NZ_CP179699
• Coordinates: 2254932..2255633 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain PR5
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2249932..2260633

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACMFG6_RS10770 (ACMFG6_10770)	-	2250238..2250681 (-)	444	WP_001246675.1	SRPBCC family protein	-
ACMFG6_RS10775 (ACMFG6_10775)	tadA	2250751..2251254 (-)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
ACMFG6_RS10780 (ACMFG6_10780)	-	2251261..2252385 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
ACMFG6_RS10785 (ACMFG6_10785)	ung	2252382..2253095 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
ACMFG6_RS10790 (ACMFG6_10790)	-	2253146..2253742 (-)	597	WP_000908452.1	6-pyruvoyl trahydropterin synthase family protein	-
ACMFG6_RS10795 (ACMFG6_10795)	gspK	2253973..2254932 (-)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
ACMFG6_RS10800 (ACMFG6_10800)	xcpW	2254932..2255633 (-)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
ACMFG6_RS10805 (ACMFG6_10805)	xcpV	2255633..2256013 (-)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
ACMFG6_RS10810 (ACMFG6_10810)	-	2256003..2256557 (-)	555	WP_000841373.1	type II secretion system protein	-
ACMFG6_RS10815 (ACMFG6_10815)	-	2256567..2257175 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
ACMFG6_RS10820 (ACMFG6_10820)	-	2257213..2257986 (-)	774	WP_000497298.1	TatD family hydrolase	-
ACMFG6_RS10825 (ACMFG6_10825)	-	2258004..2258345 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
ACMFG6_RS10830 (ACMFG6_10830)	-	2258357..2259337 (-)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
ACMFG6_RS10835 (ACMFG6_10835)	kdsB	2259349..2260110 (-)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=1092595 ACMFG6_RS10800 WP_000594589.1 2254932..2255633(-) (xcpW) [Acinetobacter baumannii strain PR5]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=1092595 ACMFG6_RS10800 WP_000594589.1 2254932..2255633(-) (xcpW) [Acinetobacter baumannii strain PR5]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996