Detailed information NTG1092521

Bioinformatically predicted

Overview

• Name: comGF
• Type: Machinery gene
• Locus tag: ACKAX6_RS07430
• Genome accession: NZ_CP179215
• Coordinates: 1569327..1569824 (-)
• Length: 165 a.a.
• NCBI ID: WP_001838632.1
• Uniprot ID: A0A6A9GZK7
• Organism: Staphylococcus aureus strain YNSA7
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1564327..1574824

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACKAX6_RS07405 (ACKAX6_07405)	gcvPB	1564489..1565961 (-)	1473	WP_000202177.1	aminomethyl-transferring glycine dehydrogenase subunit GcvPB	-
ACKAX6_RS07410 (ACKAX6_07410)	gcvPA	1565954..1567300 (-)	1347	WP_000019687.1	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	-
ACKAX6_RS07415 (ACKAX6_07415)	gcvT	1567320..1568411 (-)	1092	WP_000093349.1	glycine cleavage system aminomethyltransferase GcvT	-
ACKAX6_RS07420 (ACKAX6_07420)	-	1568570..1569094 (-)	525	WP_001015116.1	shikimate kinase	-
ACKAX6_RS07425 (ACKAX6_07425)	-	1569084..1569230 (-)	147	WP_001789879.1	hypothetical protein	-
ACKAX6_RS07430 (ACKAX6_07430)	comGF	1569327..1569824 (-)	498	WP_001838632.1	competence type IV pilus minor pilin ComGF	Machinery gene
ACKAX6_RS07435 (ACKAX6_07435)	comGE	1569742..1570041 (-)	300	WP_000844413.1	hypothetical protein	Machinery gene
ACKAX6_RS07440 (ACKAX6_07440)	comGD	1570028..1570474 (-)	447	WP_001796473.1	competence type IV pilus minor pilin ComGD	Machinery gene
ACKAX6_RS07445 (ACKAX6_07445)	comGC	1570452..1570763 (-)	312	WP_000472256.1	competence type IV pilus major pilin ComGC	Machinery gene
ACKAX6_RS07450 (ACKAX6_07450)	comGB	1570777..1571847 (-)	1071	WP_000776407.1	competence type IV pilus assembly protein ComGB	Machinery gene
ACKAX6_RS07455 (ACKAX6_07455)	comGA	1571819..1572793 (-)	975	WP_000697218.1	competence type IV pilus ATPase ComGA	Machinery gene
ACKAX6_RS07460 (ACKAX6_07460)	-	1572845..1573468 (-)	624	WP_001223008.1	MBL fold metallo-hydrolase	-
ACKAX6_RS07465 (ACKAX6_07465)	-	1573465..1573794 (-)	330	WP_001018871.1	MTH1187 family thiamine-binding protein	-
ACKAX6_RS07470 (ACKAX6_07470)	-	1573794..1574780 (-)	987	WP_000161315.1	ROK family glucokinase	-

Sequence

Protein

• Length: 165 a.a.
• Molecular weight: 19184.87 Da
• Isoelectric Point: 10.2192

>NTDB_id=1092521 ACKAX6_RS07430 WP_001838632.1 1569327..1569824(-) (comGF) [Staphylococcus aureus strain YNSA7]
MILSKVTNKFVLFQKIPLLIKRHVYSINVKAFSLIEMLVAMMVISITLLIVPDLIRLSKTFLIESRELTTVDFEFFSRDI
LEDFKGVDRNNIENREQRIILHKGEEMIEYKLINNKIIKVVNDRGNITMINNVTAFTANIYYKSIIKITITVKVGTNVQT
KTIYV

Nucleotide

• Length: 498 bp

>NTDB_id=1092521 ACKAX6_RS07430 WP_001838632.1 1569327..1569824(-) (comGF) [Staphylococcus aureus strain YNSA7]
ATGATATTAAGCAAAGTGACCAACAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTAT
TAATGTCAAAGCTTTTTCTCTCATTGAAATGTTAGTAGCGATGATGGTTATAAGTATAACTTTACTAATTGTTCCAGACT
TAATTAGACTTAGCAAAACTTTTCTAATTGAAAGTAGGGAATTAACAACTGTAGATTTCGAATTTTTCTCAAGAGATATT
CTAGAGGATTTTAAAGGAGTAGATAGAAACAATATTGAAAATAGGGAACAGCGTATCATTTTACATAAAGGTGAAGAAAT
GATCGAATACAAATTAATAAATAATAAAATTATTAAAGTTGTAAATGACAGAGGAAATATAACAATGATTAATAATGTTA
CAGCATTTACTGCAAATATCTACTATAAATCCATTATTAAAATAACGATAACAGTTAAAGTCGGTACAAATGTGCAGACT
AAAACTATTTATGTATAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (68-155)

• Prokaryotic N-terminal methylation motif (N_methyl) (28-51)

3D structure

• AlphaFold DB: A0A6A9GZK7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF	Staphylococcus aureus N315	96.364	100	0.964
comGF	Staphylococcus aureus MW2	96.364	100	0.964