Detailed information NTG1091961

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: ACMDB8_RS20640
• Genome accession: NZ_CP178857
• Coordinates: 4623763..4625997 (-)
• Length: 744 a.a.
• NCBI ID: WP_409078933.1
• Uniprot ID: -
• Organism: Pseudomonas sp. PLb12A
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4618763..4630997

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACMDB8_RS20605 (ACMDB8_20605)	murB	4619143..4620162 (-)	1020	WP_056727230.1	UDP-N-acetylmuramate dehydrogenase	-
ACMDB8_RS20610 (ACMDB8_20610)	-	4620159..4620623 (-)	465	WP_056727231.1	low molecular weight protein-tyrosine-phosphatase	-
ACMDB8_RS20615 (ACMDB8_20615)	kdsB	4620623..4621387 (-)	765	WP_056727232.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
ACMDB8_RS20620 (ACMDB8_20620)	-	4621384..4621569 (-)	186	WP_003179363.1	Trm112 family protein	-
ACMDB8_RS20625 (ACMDB8_20625)	lpxK	4621594..4622604 (-)	1011	WP_056727233.1	tetraacyldisaccharide 4'-kinase	-
ACMDB8_RS20630 (ACMDB8_20630)	-	4622604..4623032 (-)	429	WP_056727234.1	ExbD/TolR family protein	-
ACMDB8_RS20635 (ACMDB8_20635)	exbB	4623029..4623664 (-)	636	WP_056727235.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
ACMDB8_RS20640 (ACMDB8_20640)	comA	4623763..4625997 (-)	2235	WP_409078933.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
ACMDB8_RS20645 (ACMDB8_20645)	-	4626133..4626648 (+)	516	WP_409078934.1	DUF2062 domain-containing protein	-
ACMDB8_RS20650 (ACMDB8_20650)	-	4626746..4627525 (-)	780	WP_008054107.1	ABC transporter permease	-
ACMDB8_RS20655 (ACMDB8_20655)	-	4627522..4628454 (-)	933	WP_056727238.1	ABC transporter ATP-binding protein	-
ACMDB8_RS20660 (ACMDB8_20660)	-	4628587..4629210 (-)	624	WP_409078935.1	glutathione S-transferase family protein	-
ACMDB8_RS20665 (ACMDB8_20665)	-	4629254..4629913 (-)	660	WP_056727240.1	transglutaminase-like domain-containing protein	-

Sequence

Protein

• Length: 744 a.a.
• Molecular weight: 82035.38 Da
• Isoelectric Point: 10.3418

>NTDB_id=1091961 ACMDB8_RS20640 WP_409078933.1 4623763..4625997(-) (comA) [Pseudomonas sp. PLb12A]
MRTGMMALALGLLTLRFLPVLPPVWLWLAMPVAGLMLLPFRTYPVAFYLFGLSWACANAQWALDDRLPPALDGETRWVEG
RVTGLPRQDDGVVRFELTDIQSRRTRLPRQMRLAWYGGPPVSGGERWRLAVKLKRPVGLLNPQAFDYQAWLLAQRIGATG
TIKQGERLAPARWAWRDAIRQRLLAVDAQGRSGALTALVLGDGAGLSREDWQVLQDTGTVHLLVISGQHIGLLAGVVYLL
IAGLARFGLWPNRLPWLPWACGLAFAAALGYGMLAGFEVPVRRACLMIAMVLLWRLRFRHLGAWWPLLLALDGILLLEPL
SSLQPGFWLSFAAVAVLILTFGGRLGPWRWWQTWTRAQWLIAIGLCPLLLALGLPISLSGPLANLFAVPWISLVVLPPAL
LGTLLLPVPYVGEKLLWLAGGLIDGWFRALGLVSGQVPAWVPAAVPPWAWVIGAIGAFLLLLPRGLPMRPLGWPMLLMLV
FSPRPMLQEGMAEVWQLDVGQGLSILVRTRHHTLLYDAGPRFGELDQGERVVLPALRKLGVKGLDMMLISHAHADHAGGA
PAIARGLPVKQVVSGEPSDLPAQLQAGSCESGRQWTWDEVDFQLWHWPLAGDSNQNSCVLLIEANGERLLLSGDIDAAAE
RALLDSALARPTDWLQAPHHGSRSSSSNVLLDVLRPKGGLISRGQGNSFGHPHPTVIARYQKRGMAIYDSVEQGAIRLQL
GRFESPWSMRQERRFWRDPPPLNP

Nucleotide

• Length: 2235 bp

>NTDB_id=1091961 ACMDB8_RS20640 WP_409078933.1 4623763..4625997(-) (comA) [Pseudomonas sp. PLb12A]
ATGCGCACAGGGATGATGGCGCTGGCGCTGGGTCTGTTGACCTTGCGTTTTTTACCGGTATTACCGCCGGTCTGGTTGTG
GCTGGCGATGCCGGTGGCGGGTCTGATGTTGCTGCCGTTCAGGACCTATCCGGTGGCGTTTTACCTGTTCGGCTTGAGTT
GGGCCTGCGCGAATGCGCAGTGGGCGCTGGATGACCGGTTGCCGCCGGCGCTGGATGGAGAAACCCGCTGGGTCGAAGGC
CGGGTCACAGGCTTGCCCCGGCAGGACGATGGCGTCGTGCGTTTCGAATTGACCGACATCCAGTCCCGACGGACCCGGCT
GCCGCGGCAAATGCGCCTGGCCTGGTATGGCGGACCGCCGGTGAGCGGTGGCGAGCGCTGGCGGCTGGCCGTCAAGTTGA
AGCGCCCGGTCGGGCTCCTCAATCCGCAGGCCTTCGACTATCAGGCCTGGTTGTTGGCGCAACGCATCGGGGCCACCGGG
ACGATCAAGCAGGGCGAACGCCTTGCGCCAGCCCGATGGGCCTGGCGCGATGCCATCCGCCAGCGTTTGCTGGCGGTGGA
TGCCCAAGGGCGAAGCGGCGCGTTGACGGCATTGGTACTCGGGGACGGCGCCGGGCTGAGCCGCGAAGACTGGCAGGTAT
TGCAGGACACCGGCACGGTGCATCTGTTGGTGATTTCCGGGCAGCACATCGGATTGCTGGCGGGCGTGGTGTATCTGTTG
ATCGCCGGCCTGGCCCGCTTCGGGTTATGGCCGAACCGTCTGCCATGGTTGCCCTGGGCGTGTGGCCTGGCATTCGCCGC
TGCGCTCGGTTACGGGATGCTGGCCGGTTTCGAGGTGCCGGTGCGGCGGGCCTGCCTGATGATTGCAATGGTGTTGTTGT
GGCGTCTGCGGTTCCGTCATCTCGGTGCATGGTGGCCACTGTTGCTGGCACTCGACGGCATATTGCTGCTGGAACCGCTG
TCGAGTCTCCAGCCTGGTTTCTGGCTGTCTTTCGCGGCCGTGGCAGTCTTGATATTGACCTTCGGCGGACGTTTGGGGCC
TTGGCGCTGGTGGCAGACCTGGACCCGTGCCCAGTGGCTGATTGCAATCGGTCTGTGTCCGTTGTTACTGGCGCTGGGGT
TGCCAATCAGTCTCAGCGGGCCGCTGGCCAATTTATTTGCGGTGCCCTGGATCAGTCTGGTGGTCCTGCCGCCGGCGTTG
CTCGGGACACTGTTGCTGCCGGTGCCTTACGTGGGTGAGAAGTTGCTGTGGCTGGCCGGTGGCCTGATCGATGGCTGGTT
CAGGGCGTTGGGGCTCGTCTCCGGCCAGGTTCCCGCGTGGGTGCCCGCGGCAGTCCCGCCATGGGCTTGGGTAATCGGTG
CCATTGGCGCCTTTTTGCTATTGCTGCCGCGAGGCTTGCCGATGCGCCCGTTAGGTTGGCCCATGCTGTTGATGCTGGTT
TTTTCGCCCAGGCCGATGTTGCAGGAGGGCATGGCCGAAGTCTGGCAACTGGATGTGGGGCAGGGCTTGTCAATCCTGGT
ACGCACTCGGCATCACACGTTGCTGTACGACGCCGGCCCGCGTTTCGGTGAACTCGACCAAGGGGAGCGGGTGGTGCTGC
CGGCATTGCGCAAACTGGGGGTGAAGGGGCTCGACATGATGCTTATCAGCCACGCCCATGCCGATCATGCCGGCGGTGCC
CCGGCGATTGCCAGGGGCTTGCCGGTGAAACAGGTGGTCAGTGGTGAACCGTCAGACTTGCCTGCGCAATTGCAAGCCGG
GAGCTGTGAGAGCGGTCGGCAATGGACCTGGGATGAAGTCGATTTCCAGCTCTGGCACTGGCCATTGGCCGGCGACAGCA
ACCAGAACTCCTGTGTCTTGTTGATCGAAGCCAATGGTGAACGGTTGCTGTTGAGTGGCGACATTGATGCCGCCGCCGAA
AGAGCCCTGCTGGACAGCGCGTTGGCCCGGCCCACCGATTGGCTGCAGGCGCCACACCACGGCAGTCGCAGTTCGTCGTC
CAATGTCCTGTTGGATGTCCTGCGACCCAAAGGGGGGCTGATCTCTCGCGGGCAAGGCAATTCGTTTGGCCATCCGCATC
CTACGGTCATCGCGCGTTATCAAAAACGTGGAATGGCAATCTACGACAGCGTCGAACAGGGTGCCATTCGTCTGCAACTG
GGACGCTTCGAGTCGCCGTGGTCAATGCGCCAGGAACGGCGTTTCTGGCGCGATCCGCCGCCCTTGAATCCATAA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (498-681)

• Domain of unknown function (DUF4131) (DUF4131) (23-167)

• Competence protein (Competence) (198-464)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	63.394	95.833	0.608