Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | HW09_RS23565 | Genome accession | NZ_CP008857 |
| Coordinates | 5128358..5128723 (+) | Length | 121 a.a. |
| NCBI ID | WP_003084587.1 | Uniprot ID | A0A0H2ZKW2 |
| Organism | Pseudomonas aeruginosa strain F30658 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 5123358..5133723
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HW09_RS23535 (HW09_23790) | pyrR | 5123980..5124492 (-) | 513 | WP_003084574.1 | bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR | - |
| HW09_RS23540 (HW09_23795) | ruvX | 5124604..5125038 (-) | 435 | WP_003084575.1 | Holliday junction resolvase RuvX | - |
| HW09_RS23545 (HW09_23800) | - | 5125038..5125607 (-) | 570 | WP_003100947.1 | YqgE/AlgH family protein | - |
| HW09_RS23550 (HW09_23805) | - | 5125656..5126549 (-) | 894 | WP_015649761.1 | energy transducer TonB | - |
| HW09_RS23555 (HW09_23810) | gshB | 5126696..5127649 (-) | 954 | WP_003100943.1 | glutathione synthase | - |
| HW09_RS23560 (HW09_23815) | pilG | 5127904..5128311 (+) | 408 | WP_003084583.1 | twitching motility response regulator PilG | Regulator |
| HW09_RS23565 (HW09_23820) | pilH | 5128358..5128723 (+) | 366 | WP_003084587.1 | twitching motility response regulator PilH | Machinery gene |
| HW09_RS23570 (HW09_23825) | - | 5128774..5129310 (+) | 537 | WP_003084590.1 | chemotaxis protein CheW | - |
| HW09_RS23575 (HW09_23830) | pilJ | 5129395..5131443 (+) | 2049 | WP_003084592.1 | chemotaxis chemoreceptor PilJ | - |
| HW09_RS23580 (HW09_23835) | pilK | 5131504..5132379 (+) | 876 | WP_003100938.1 | type 4 fimbrial methyltransferase PilK | - |
Sequence
Protein
Download Length: 121 a.a. Molecular weight: 13273.30 Da Isoelectric Point: 5.1961
>NTDB_id=109148 HW09_RS23565 WP_003084587.1 5128358..5128723(+) (pilH) [Pseudomonas aeruginosa strain F30658]
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
Nucleotide
Download Length: 366 bp
>NTDB_id=109148 HW09_RS23565 WP_003084587.1 5128358..5128723(+) (pilH) [Pseudomonas aeruginosa strain F30658]
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAATTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAATTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
36.975 |
98.347 |
0.364 |