Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | ACLZ8E_RS09895 | Genome accession | NZ_CP178726 |
| Coordinates | 2035280..2035675 (-) | Length | 131 a.a. |
| NCBI ID | WP_001829977.1 | Uniprot ID | A0A4Q9W3V8 |
| Organism | Staphylococcus epidermidis strain 13.4-1 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2030280..2040675
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACLZ8E_RS09870 (ACLZ8E_09870) | thiE | 2031020..2031658 (-) | 639 | WP_002505076.1 | thiamine phosphate synthase | - |
| ACLZ8E_RS09875 (ACLZ8E_09875) | thiM | 2031664..2032452 (-) | 789 | WP_001829971.1 | hydroxyethylthiazole kinase | - |
| ACLZ8E_RS09880 (ACLZ8E_09880) | thiD | 2032445..2033266 (-) | 822 | WP_001832736.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| ACLZ8E_RS09885 (ACLZ8E_09885) | tenA | 2033259..2033948 (-) | 690 | WP_001829894.1 | thiaminase II | - |
| ACLZ8E_RS09890 (ACLZ8E_09890) | - | 2034233..2034892 (-) | 660 | WP_001829904.1 | transglycosylase family protein | - |
| ACLZ8E_RS09895 (ACLZ8E_09895) | ssb | 2035280..2035675 (-) | 396 | WP_001829977.1 | single-stranded DNA-binding protein | Machinery gene |
| ACLZ8E_RS09900 (ACLZ8E_09900) | - | 2035866..2036306 (+) | 441 | WP_001829935.1 | YwpF-like family protein | - |
| ACLZ8E_RS09905 (ACLZ8E_09905) | fabZ | 2036624..2037061 (-) | 438 | WP_001829953.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| ACLZ8E_RS09910 (ACLZ8E_09910) | murA | 2037095..2038360 (-) | 1266 | WP_001829978.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| ACLZ8E_RS09915 (ACLZ8E_09915) | - | 2038470..2038703 (-) | 234 | WP_002456242.1 | DUF1146 family protein | - |
| ACLZ8E_RS09920 (ACLZ8E_09920) | - | 2038852..2039256 (-) | 405 | WP_001829924.1 | F0F1 ATP synthase subunit epsilon | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15158.08 Da Isoelectric Point: 5.2661
>NTDB_id=1091029 ACLZ8E_RS09895 WP_001829977.1 2035280..2035675(-) (ssb) [Staphylococcus epidermidis strain 13.4-1]
MLNKIVIVGRMTKDAQIYEKEDNKIATFCVATERNYKDDINEISTDYLLCKAFGKTATNIEKYTSQGTLVGITGQMRSRK
YEKEGQTHFVTELYVETIKFMSPKNKNNETPSDNQFENNTYQPDDLEIIHI
MLNKIVIVGRMTKDAQIYEKEDNKIATFCVATERNYKDDINEISTDYLLCKAFGKTATNIEKYTSQGTLVGITGQMRSRK
YEKEGQTHFVTELYVETIKFMSPKNKNNETPSDNQFENNTYQPDDLEIIHI
Nucleotide
Download Length: 396 bp
>NTDB_id=1091029 ACLZ8E_RS09895 WP_001829977.1 2035280..2035675(-) (ssb) [Staphylococcus epidermidis strain 13.4-1]
ATGTTAAATAAAATAGTCATTGTTGGTAGAATGACGAAAGATGCTCAAATCTATGAAAAGGAGGATAACAAAATAGCAAC
ATTTTGCGTTGCTACAGAAAGAAACTACAAAGATGATATTAATGAAATTTCTACAGATTATTTACTTTGTAAAGCTTTCG
GTAAAACTGCCACTAATATTGAAAAGTACACTAGTCAAGGTACTTTAGTAGGTATAACTGGACAAATGCGTTCAAGAAAA
TATGAAAAAGAAGGCCAAACACATTTTGTTACAGAATTATACGTTGAAACAATAAAATTCATGTCCCCAAAAAATAAAAA
CAATGAAACTCCCTCTGATAATCAATTTGAAAACAACACTTATCAACCTGATGATTTAGAAATAATTCATATTTAA
ATGTTAAATAAAATAGTCATTGTTGGTAGAATGACGAAAGATGCTCAAATCTATGAAAAGGAGGATAACAAAATAGCAAC
ATTTTGCGTTGCTACAGAAAGAAACTACAAAGATGATATTAATGAAATTTCTACAGATTATTTACTTTGTAAAGCTTTCG
GTAAAACTGCCACTAATATTGAAAAGTACACTAGTCAAGGTACTTTAGTAGGTATAACTGGACAAATGCGTTCAAGAAAA
TATGAAAAAGAAGGCCAAACACATTTTGTTACAGAATTATACGTTGAAACAATAAAATTCATGTCCCCAAAAAATAAAAA
CAATGAAACTCCCTCTGATAATCAATTTGAAAACAACACTTATCAACCTGATGATTTAGAAATAATTCATATTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
73.282 |
100 |
0.733 |
| ssb | Staphylococcus aureus MW2 |
72.519 |
100 |
0.725 |