Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | ACLZ8F_RS03860 | Genome accession | NZ_CP178723 |
| Coordinates | 846962..847357 (+) | Length | 131 a.a. |
| NCBI ID | WP_002457121.1 | Uniprot ID | A0A7H5C5S7 |
| Organism | Staphylococcus epidermidis strain 42.1-1 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 841962..852357
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACLZ8F_RS03835 (ACLZ8F_03835) | - | 843381..843785 (+) | 405 | WP_002447782.1 | F0F1 ATP synthase subunit epsilon | - |
| ACLZ8F_RS03840 (ACLZ8F_03840) | - | 843934..844167 (+) | 234 | WP_002456242.1 | DUF1146 family protein | - |
| ACLZ8F_RS03845 (ACLZ8F_03845) | murA | 844277..845542 (+) | 1266 | WP_001829978.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| ACLZ8F_RS03850 (ACLZ8F_03850) | fabZ | 845576..846013 (+) | 438 | WP_001829953.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| ACLZ8F_RS03855 (ACLZ8F_03855) | - | 846331..846771 (-) | 441 | WP_001829935.1 | YwpF-like family protein | - |
| ACLZ8F_RS03860 (ACLZ8F_03860) | ssb | 846962..847357 (+) | 396 | WP_002457121.1 | single-stranded DNA-binding protein | Machinery gene |
| ACLZ8F_RS03865 (ACLZ8F_03865) | - | 847745..848404 (+) | 660 | WP_001829904.1 | transglycosylase family protein | - |
| ACLZ8F_RS03870 (ACLZ8F_03870) | tenA | 848688..849377 (+) | 690 | WP_001829894.1 | thiaminase II | - |
| ACLZ8F_RS03875 (ACLZ8F_03875) | thiD | 849370..850191 (+) | 822 | WP_001832736.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| ACLZ8F_RS03880 (ACLZ8F_03880) | thiM | 850184..850972 (+) | 789 | WP_002469583.1 | hydroxyethylthiazole kinase | - |
| ACLZ8F_RS03885 (ACLZ8F_03885) | thiE | 850978..851616 (+) | 639 | WP_002505076.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15159.02 Da Isoelectric Point: 5.2661
>NTDB_id=1090972 ACLZ8F_RS03860 WP_002457121.1 846962..847357(+) (ssb) [Staphylococcus epidermidis strain 42.1-1]
MLNKIVIVGRMTKDAQIYEKEDNKIATFCVATERNYKDDNNEISTDYLLCKAFGKTATNIEKYTSQGTLVGITGQMRSRK
YEKEGQTHFVTELYVETIKFMSPKNKNNETPSDNQFENNTYQPDDLEIIHI
MLNKIVIVGRMTKDAQIYEKEDNKIATFCVATERNYKDDNNEISTDYLLCKAFGKTATNIEKYTSQGTLVGITGQMRSRK
YEKEGQTHFVTELYVETIKFMSPKNKNNETPSDNQFENNTYQPDDLEIIHI
Nucleotide
Download Length: 396 bp
>NTDB_id=1090972 ACLZ8F_RS03860 WP_002457121.1 846962..847357(+) (ssb) [Staphylococcus epidermidis strain 42.1-1]
ATGTTAAATAAAATAGTCATTGTTGGTAGAATGACGAAAGATGCTCAAATCTATGAAAAGGAGGATAACAAAATAGCAAC
ATTTTGCGTTGCTACAGAAAGAAACTACAAAGATGATAATAATGAAATTTCTACAGATTATTTACTTTGTAAAGCTTTCG
GTAAAACTGCCACTAATATTGAAAAGTACACTAGTCAAGGTACTTTAGTAGGTATAACTGGACAAATGCGTTCAAGAAAA
TATGAAAAAGAAGGCCAAACACATTTTGTTACAGAATTATACGTTGAAACAATAAAATTCATGTCCCCAAAAAATAAAAA
CAATGAAACTCCCTCTGATAATCAATTTGAAAACAACACTTATCAACCTGATGATTTAGAAATAATTCATATTTAA
ATGTTAAATAAAATAGTCATTGTTGGTAGAATGACGAAAGATGCTCAAATCTATGAAAAGGAGGATAACAAAATAGCAAC
ATTTTGCGTTGCTACAGAAAGAAACTACAAAGATGATAATAATGAAATTTCTACAGATTATTTACTTTGTAAAGCTTTCG
GTAAAACTGCCACTAATATTGAAAAGTACACTAGTCAAGGTACTTTAGTAGGTATAACTGGACAAATGCGTTCAAGAAAA
TATGAAAAAGAAGGCCAAACACATTTTGTTACAGAATTATACGTTGAAACAATAAAATTCATGTCCCCAAAAAATAAAAA
CAATGAAACTCCCTCTGATAATCAATTTGAAAACAACACTTATCAACCTGATGATTTAGAAATAATTCATATTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
74.046 |
100 |
0.74 |
| ssb | Staphylococcus aureus MW2 |
73.282 |
100 |
0.733 |