Detailed information    

insolico Bioinformatically predicted

Overview


Name   nin/comJ   Type   Regulator
Locus tag   ACL6EO_RS01730 Genome accession   NZ_CP178718
Coordinates   320794..321192 (-) Length   132 a.a.
NCBI ID   WP_014416873.1    Uniprot ID   I2C179
Organism   Bacillus velezensis strain SY1154     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context


Location: 315794..326192
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACL6EO_RS01705 (ACL6EO_01705) - 315966..317168 (+) 1203 WP_021494201.1 GTP-binding protein -
  ACL6EO_RS01710 (ACL6EO_01710) - 317233..318369 (+) 1137 WP_021494202.1 zinc-dependent alcohol dehydrogenase -
  ACL6EO_RS01715 (ACL6EO_01715) - 318384..318818 (+) 435 WP_021494203.1 RDD family protein -
  ACL6EO_RS01720 (ACL6EO_01720) - 318935..319213 (+) 279 WP_263612330.1 YckD family protein -
  ACL6EO_RS01725 (ACL6EO_01725) - 319317..320753 (+) 1437 WP_021494204.1 glycoside hydrolase family 1 protein -
  ACL6EO_RS01730 (ACL6EO_01730) nin/comJ 320794..321192 (-) 399 WP_014416873.1 competence protein ComJ Regulator
  ACL6EO_RS01735 (ACL6EO_01735) nucA/comI 321213..321650 (-) 438 WP_003156588.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  ACL6EO_RS01740 (ACL6EO_01740) hxlB 321981..322538 (-) 558 WP_021494205.1 6-phospho-3-hexuloisomerase -
  ACL6EO_RS01745 (ACL6EO_01745) hxlA 322535..323170 (-) 636 WP_014416875.1 3-hexulose-6-phosphate synthase -
  ACL6EO_RS01750 (ACL6EO_01750) - 323402..323764 (+) 363 WP_021494206.1 winged helix-turn-helix transcriptional regulator -

Sequence


Protein


Download         Length: 132 a.a.        Molecular weight: 14893.89 Da        Isoelectric Point: 4.7846

>NTDB_id=1090893 ACL6EO_RS01730 WP_014416873.1 320794..321192(-) (nin/comJ) [Bacillus velezensis strain SY1154]
MIKSWKPQELAISYHQFTIFQKDSEPPVIDWTDEAIEKGYAEADGAVSFEARRNTRAFIVLRLNTSEPVPSYEKKATVPF
EAVKDGIEIESVMSKRLSFNIPKGRYSLTCYSVPAEISDLHADTYIIDAAAM

Nucleotide


Download         Length: 399 bp        

>NTDB_id=1090893 ACL6EO_RS01730 WP_014416873.1 320794..321192(-) (nin/comJ) [Bacillus velezensis strain SY1154]
TTGATTAAATCATGGAAACCGCAAGAACTGGCCATTTCTTATCATCAATTTACAATCTTCCAAAAAGATTCAGAACCGCC
TGTTATCGATTGGACCGATGAAGCCATTGAAAAAGGATATGCGGAAGCTGACGGAGCTGTTTCATTTGAGGCAAGGAGAA
ATACGAGGGCATTTATCGTCCTCAGGCTTAACACAAGTGAACCGGTACCATCCTATGAGAAAAAAGCGACTGTTCCCTTT
GAGGCTGTAAAAGATGGAATTGAGATTGAAAGCGTGATGTCAAAGCGGCTTTCTTTTAATATTCCGAAAGGCCGATACAG
CCTTACCTGTTATTCAGTGCCTGCCGAAATATCCGATCTTCATGCGGATACGTATATTATTGATGCAGCCGCAATGTAA

Domains


Predicted by InterproScan.

(9-129)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB I2C179

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

76.515

100

0.765


Multiple sequence alignment