Detailed information    

insolico Bioinformatically predicted

Overview

Name   recN   Type   Machinery gene
Locus tag   ACL6ER_RS11450 Genome accession   NZ_CP178717
Coordinates   2343855..2345585 (-) Length   576 a.a.
NCBI ID   WP_268332585.1    Uniprot ID   -
Organism   Bacillus inaquosorum strain SY1167     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2338855..2350585
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACL6ER_RS11420 (ACL6ER_11420) - 2339440..2339575 (+) 136 Protein_2240 hypothetical protein -
  ACL6ER_RS11425 (ACL6ER_11425) - 2339648..2340766 (+) 1119 WP_268332584.1 NADH-dependent flavin oxidoreductase -
  ACL6ER_RS11430 (ACL6ER_11430) - 2340827..2340961 (-) 135 WP_003236881.1 hypothetical protein -
  ACL6ER_RS11435 (ACL6ER_11435) - 2341001..2341180 (-) 180 WP_003236884.1 hypothetical protein -
  ACL6ER_RS11440 (ACL6ER_11440) spo0A 2341322..2342125 (-) 804 WP_003226427.1 sporulation transcription factor Spo0A Regulator
  ACL6ER_RS11445 (ACL6ER_11445) spoIVB 2342401..2343681 (-) 1281 WP_084993751.1 SpoIVB peptidase -
  ACL6ER_RS11450 (ACL6ER_11450) recN 2343855..2345585 (-) 1731 WP_268332585.1 DNA repair protein RecN Machinery gene
  ACL6ER_RS11455 (ACL6ER_11455) argR 2345621..2346070 (-) 450 WP_003236889.1 arginine repressor ArgR -
  ACL6ER_RS11460 (ACL6ER_11460) - 2346168..2347013 (-) 846 WP_019258865.1 TlyA family RNA methyltransferase -
  ACL6ER_RS11465 (ACL6ER_11465) dxs 2347010..2348911 (-) 1902 WP_268332586.1 1-deoxy-D-xylulose-5-phosphate synthase -
  ACL6ER_RS11470 (ACL6ER_11470) - 2349092..2349982 (-) 891 WP_003236893.1 polyprenyl synthetase family protein -
  ACL6ER_RS11475 (ACL6ER_11475) - 2349972..2350226 (-) 255 WP_003226409.1 exodeoxyribonuclease VII small subunit -

Sequence

Protein


Download         Length: 576 a.a.        Molecular weight: 64549.26 Da        Isoelectric Point: 4.7094

>NTDB_id=1090845 ACL6ER_RS11450 WP_268332585.1 2343855..2345585(-) (recN) [Bacillus inaquosorum strain SY1167]
MLAELSIKNFAIIEELTVSFERGLTVLTGETGAGKSIIIDAISLLVGGRGSSEFVRYGEAKAELEGLFLLESGHPVFDIC
AEQGIDVSDEMIVMRRDISTSGKSVCRVNGKLVTIASLREIGRLLLDIHGQHDNQLLMEDENHLQLLDKFAGAEVESALQ
AYQEGYQRYTKLLKKLKQLSESEQEMAHRLDLIQFQLEEIESAKLELNEDEQLQEERQQISNFEKIYESLQNAYNALRSE
QGGLDWVGMASAQLEDISDINEPLKKLSESVSNSYYLLEDATFQMRNMLDELEYDPERLNYIETRLNEIKQLKRKYGASV
EDILEYASKIEEEIDQIENRDSHLQSLKKELDSVGKDVAVEAANVSQIRKAWAKKLADEIHRELKSLYMEKSTFDTEFKV
RTASRNEEAPIVNGQPVQLTEQGIDLVKFLISTNTGEPLKSLSKVASGGELSRVMLAIKSIFSSQQDVTSIIFDEVDTGV
SGRVAQAIAEKIHKVSIGSQVLCITHLPQVAAMADTHLYIAKELKDGRTTTHVKPLSKQEKVVEIGRMIAGVEVTDLTKR
HAKELLKQADQVKTTG

Nucleotide


Download         Length: 1731 bp        

>NTDB_id=1090845 ACL6ER_RS11450 WP_268332585.1 2343855..2345585(-) (recN) [Bacillus inaquosorum strain SY1167]
TTGTTAGCTGAACTATCGATTAAAAACTTTGCCATTATTGAGGAACTGACGGTTTCTTTTGAACGCGGGCTCACGGTTTT
AACAGGAGAAACCGGAGCCGGCAAATCCATCATCATAGATGCCATTTCTCTTTTAGTCGGAGGCCGAGGATCATCTGAAT
TTGTCAGATATGGAGAAGCAAAAGCCGAGCTTGAAGGGCTGTTTCTGTTGGAGAGCGGCCATCCCGTTTTTGATATATGC
GCTGAGCAGGGAATCGACGTTTCAGACGAAATGATCGTTATGAGAAGGGATATCAGCACGAGTGGAAAAAGCGTTTGCCG
GGTTAATGGCAAGCTTGTCACGATTGCCTCGTTAAGAGAGATCGGCAGGCTTTTATTAGATATTCACGGGCAGCACGATA
ACCAGCTGTTAATGGAGGACGAAAATCATCTCCAGCTTTTGGACAAGTTTGCCGGAGCCGAAGTGGAAAGCGCGCTCCAA
GCATATCAGGAAGGATACCAGCGTTACACGAAGCTGCTTAAAAAGCTAAAACAGCTTTCTGAAAGCGAACAGGAAATGGC
CCACCGCCTTGATCTCATTCAATTTCAGCTCGAAGAAATCGAATCGGCAAAGCTTGAGCTTAATGAAGATGAACAGCTTC
AAGAAGAACGCCAGCAAATTTCAAACTTTGAGAAGATATATGAATCGCTGCAAAATGCGTATAACGCGCTTCGCAGTGAG
CAAGGCGGACTGGACTGGGTCGGAATGGCATCAGCGCAGCTTGAAGATATATCCGATATTAATGAACCGCTGAAAAAACT
GTCTGAAAGTGTTTCGAACTCCTACTATCTTCTGGAGGACGCTACATTTCAGATGAGAAATATGCTGGACGAGCTTGAGT
ATGATCCGGAACGCCTGAATTATATTGAAACACGTCTTAATGAAATCAAACAGCTGAAACGAAAATATGGTGCATCTGTT
GAGGATATTTTAGAATACGCTTCTAAAATTGAAGAAGAGATAGACCAAATTGAAAACAGGGACAGCCACCTTCAAAGCTT
GAAGAAGGAGCTTGACTCAGTCGGCAAAGATGTCGCAGTGGAAGCGGCAAATGTTTCACAAATCAGGAAAGCATGGGCGA
AAAAGCTGGCCGATGAGATTCATCGGGAATTAAAAAGCCTGTACATGGAAAAGTCAACGTTTGATACGGAATTTAAGGTC
AGAACAGCGTCCCGCAATGAGGAGGCGCCGATTGTAAACGGCCAGCCTGTTCAGCTGACTGAACAAGGGATAGATCTGGT
GAAGTTTTTAATTTCAACCAATACAGGTGAACCGCTAAAATCTCTTTCGAAAGTCGCTTCCGGGGGAGAGTTGTCTCGGG
TAATGCTTGCCATAAAAAGCATTTTTTCCTCTCAGCAGGATGTGACGTCGATTATATTCGATGAGGTCGATACCGGTGTA
AGCGGCAGAGTCGCCCAGGCAATCGCTGAGAAGATCCATAAAGTGTCAATAGGATCACAAGTGCTGTGTATTACACACTT
GCCTCAGGTGGCTGCCATGGCCGATACGCACCTTTATATTGCGAAGGAGTTAAAAGACGGCAGAACGACGACACATGTCA
AGCCGCTGTCTAAGCAGGAAAAGGTAGTGGAAATCGGGCGCATGATTGCAGGAGTCGAAGTAACAGACTTGACGAAACGC
CATGCGAAAGAACTTTTAAAACAAGCGGATCAAGTCAAAACAACTGGGTAA

Domains

Predicted by InterproScan.

AAA domain (AAA_23)

(4-226)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recN Bacillus subtilis subsp. subtilis str. 168

97.743

100

0.977

Multiple sequence alignment