Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   ACL6ER_RS11440 Genome accession   NZ_CP178717
Coordinates   2341322..2342125 (-) Length   267 a.a.
NCBI ID   WP_003226427.1    Uniprot ID   -
Organism   Bacillus inaquosorum strain SY1167     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 2336322..2347125
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACL6ER_RS11405 (ACL6ER_11405) - 2337366..2338097 (-) 732 WP_268332582.1 glycerophosphodiester phosphodiesterase -
  ACL6ER_RS11410 (ACL6ER_11410) - 2338176..2338796 (-) 621 WP_268332583.1 N-acetylmuramoyl-L-alanine amidase family protein -
  ACL6ER_RS11415 (ACL6ER_11415) - 2338816..2339112 (-) 297 WP_060400040.1 hypothetical protein -
  ACL6ER_RS11420 (ACL6ER_11420) - 2339440..2339575 (+) 136 Protein_2240 hypothetical protein -
  ACL6ER_RS11425 (ACL6ER_11425) - 2339648..2340766 (+) 1119 WP_268332584.1 NADH-dependent flavin oxidoreductase -
  ACL6ER_RS11430 (ACL6ER_11430) - 2340827..2340961 (-) 135 WP_003236881.1 hypothetical protein -
  ACL6ER_RS11435 (ACL6ER_11435) - 2341001..2341180 (-) 180 WP_003236884.1 hypothetical protein -
  ACL6ER_RS11440 (ACL6ER_11440) spo0A 2341322..2342125 (-) 804 WP_003226427.1 sporulation transcription factor Spo0A Regulator
  ACL6ER_RS11445 (ACL6ER_11445) spoIVB 2342401..2343681 (-) 1281 WP_084993751.1 SpoIVB peptidase -
  ACL6ER_RS11450 (ACL6ER_11450) recN 2343855..2345585 (-) 1731 WP_268332585.1 DNA repair protein RecN Machinery gene
  ACL6ER_RS11455 (ACL6ER_11455) argR 2345621..2346070 (-) 450 WP_003236889.1 arginine repressor ArgR -
  ACL6ER_RS11460 (ACL6ER_11460) - 2346168..2347013 (-) 846 WP_019258865.1 TlyA family RNA methyltransferase -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29691.19 Da        Isoelectric Point: 6.3913

>NTDB_id=1090844 ACL6ER_RS11440 WP_003226427.1 2341322..2342125(-) (spo0A) [Bacillus inaquosorum strain SY1167]
MEKIKVCVADDNRELVSLLSEYIEGQEDMEVIGVAYNGQECLSLFKEKDPDVLVLDIIMPHLDGLAVLERLRESDLKKQP
NVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNASSVTHRAPSSQSSIIRSSQPEPKKKNLDASITSI
IHEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTV
SMTKAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 804 bp        

>NTDB_id=1090844 ACL6ER_RS11440 WP_003226427.1 2341322..2342125(-) (spo0A) [Bacillus inaquosorum strain SY1167]
GTGGAGAAAATTAAAGTTTGTGTTGCTGATGATAATCGAGAGCTGGTAAGCCTGTTGAGTGAATATATAGAAGGACAGGA
AGACATGGAAGTGATCGGTGTAGCTTATAACGGACAGGAATGCCTGTCGTTGTTTAAAGAAAAAGATCCCGATGTGCTCG
TATTGGATATTATTATGCCGCATTTGGACGGACTTGCGGTTTTAGAGCGGCTGAGGGAATCAGATCTGAAAAAACAGCCG
AATGTCATTATGCTGACAGCCTTTGGACAGGAAGATGTCACGAAAAAGGCCGTCGATTTAGGCGCGTCCTACTTTATTCT
CAAACCGTTTGATATGGAAAACCTTGTCGGACATATCCGTCAGGTCAGCGGAAATGCCAGCAGCGTGACGCACCGTGCGC
CATCATCGCAAAGCAGCATTATACGCAGCAGCCAGCCTGAACCAAAAAAGAAAAATCTCGACGCGAGCATCACAAGCATT
ATCCATGAAATCGGCGTCCCGGCGCATATTAAAGGCTATCTCTATCTGCGCGAAGCAATCTCAATGGTATACAATGACAT
CGAATTGCTCGGCAGCATTACAAAAGTCCTCTATCCGGACATCGCCAAAAAATTCAACACAACCGCAAGCCGTGTAGAAA
GAGCGATCCGCCATGCAATTGAAGTGGCGTGGAGCAGAGGAAACATTGACTCCATTTCCTCATTATTCGGCTATACAGTC
AGCATGACAAAAGCTAAACCGACAAATTCAGAGTTCATTGCAATGGTTGCGGATAAGCTGAGATTAGAGCATAAGGCTTC
TTAA

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(157-260)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment