Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   ACL6ER_RS01150 Genome accession   NZ_CP178717
Coordinates   257847..258797 (+) Length   316 a.a.
NCBI ID   WP_003240192.1    Uniprot ID   -
Organism   Bacillus inaquosorum strain SY1167     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 252847..263797
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACL6ER_RS01125 (ACL6ER_01125) yclK 252912..254327 (+) 1416 WP_268285109.1 two-component system sensor histidine kinase YclK -
  ACL6ER_RS01130 (ACL6ER_01130) rapC 254490..255638 (+) 1149 WP_019257465.1 response regulator aspartate phosphatase RapC Regulator
  ACL6ER_RS01135 (ACL6ER_01135) phrC 255622..255744 (+) 123 WP_003240188.1 phosphatase RapC inhibitor PhrC Regulator
  ACL6ER_RS01140 (ACL6ER_01140) - 255840..255947 (-) 108 WP_019257466.1 YjcZ family sporulation protein -
  ACL6ER_RS01145 (ACL6ER_01145) - 256090..257463 (-) 1374 WP_225516446.1 aspartate kinase -
  ACL6ER_RS01150 (ACL6ER_01150) ceuB 257847..258797 (+) 951 WP_003240192.1 petrobactin ABC transporter permease YclN Machinery gene
  ACL6ER_RS01155 (ACL6ER_01155) yclO 258790..259737 (+) 948 WP_060397923.1 petrobactin ABC transporter permease YclO -
  ACL6ER_RS01160 (ACL6ER_01160) yclP 259731..260489 (+) 759 WP_003240196.1 petrobactin ABC transporter ATP-binding protein YclP -
  ACL6ER_RS01165 (ACL6ER_01165) - 260511..261467 (+) 957 WP_003240199.1 siderophore ABC transporter substrate-binding protein -
  ACL6ER_RS01170 (ACL6ER_01170) - 261513..262931 (-) 1419 WP_003240201.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34848.21 Da        Isoelectric Point: 9.8375

>NTDB_id=1090816 ACL6ER_RS01150 WP_003240192.1 257847..258797(+) (ceuB) [Bacillus inaquosorum strain SY1167]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSNQEASTLFASRLPRLISIIIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLMKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGSIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYIYADKFTVAGMGESFSVNLGLKYKRVVNIGLIIVSLVTSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTALLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=1090816 ACL6ER_RS01150 WP_003240192.1 257847..258797(+) (ceuB) [Bacillus inaquosorum strain SY1167]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGCGTGGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAACCAAGAGGCGTCAACGCTGTTTGCTAGCCGTTTGCCGCGATTGATCAGCATTATCA
TCGCTGGCTTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAACAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCCTGCTGCTGTTTACATCCGCCAGTCCTTTAATGAAAATGCT
GGTTGCATTTGTCTTTGCCCTTGCAGGAAATTTCTTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACGATCT
TTATTCCGCTTGTCGGGTTAATGCTCGGGAGTATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTTCAAGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATATTTATGCGGATAAATTCACAGTGGCCGGTATGGGAGAAAGCTTTTCTGTCAACCTCGGCC
TGAAGTACAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCTTGGTCACGTCTCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTCAAGAGCAGCCTGCCGCATAC
TGCGCTATTGGGAGCGGTTTTTGTGCTGTTTTGCGATATATTGGGCAGAATCATTATCTTCCCTTACGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCATATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.215

100

0.522

Multiple sequence alignment