Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   ACL6ER_RS00955 Genome accession   NZ_CP178717
Coordinates   197406..197804 (-) Length   132 a.a.
NCBI ID   WP_133488532.1    Uniprot ID   -
Organism   Bacillus inaquosorum strain SY1167     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 192406..202804
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACL6ER_RS00930 (ACL6ER_00930) - 192979..193659 (-) 681 WP_019257432.1 amino acid ABC transporter permease -
  ACL6ER_RS00935 (ACL6ER_00935) - 193669..194532 (-) 864 WP_268332504.1 transporter substrate-binding domain-containing protein -
  ACL6ER_RS00940 (ACL6ER_00940) - 194915..195370 (+) 456 WP_003241134.1 RDD family protein -
  ACL6ER_RS00945 (ACL6ER_00945) - 195452..195784 (+) 333 WP_003241133.1 YckD family protein -
  ACL6ER_RS00950 (ACL6ER_00950) bglC 195936..197369 (+) 1434 WP_268332505.1 6-phospho-beta-glucosidase -
  ACL6ER_RS00955 (ACL6ER_00955) nin/comJ 197406..197804 (-) 399 WP_133488532.1 DNA-entry nuclease inhibitor Regulator
  ACL6ER_RS00960 (ACL6ER_00960) nucA/comI 197831..198280 (-) 450 WP_268332506.1 DNA-entry nuclease Machinery gene
  ACL6ER_RS00965 (ACL6ER_00965) tlpC 198455..200179 (-) 1725 WP_413325949.1 methyl-accepting chemotaxis protein TlpC -
  ACL6ER_RS00970 (ACL6ER_00970) hxlB 200291..200848 (-) 558 WP_225516474.1 6-phospho-3-hexuloisomerase -
  ACL6ER_RS00975 (ACL6ER_00975) hxlA 200854..201486 (-) 633 WP_003241120.1 3-hexulose-6-phosphate synthase -
  ACL6ER_RS00980 (ACL6ER_00980) hxlR 201718..202080 (+) 363 WP_003241118.1 transcriptional activator HxlR -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14979.90 Da        Isoelectric Point: 4.6250

>NTDB_id=1090812 ACL6ER_RS00955 WP_133488532.1 197406..197804(-) (nin/comJ) [Bacillus inaquosorum strain SY1167]
MIKSWKPQELSISYHQFTVFQKDSAPPVMDWTDEAIEKGYAAEDGAISFEAQRNTKAFILLRLNSSETVNSYEKKVTVPF
HVTENGIEIESIMSKRLSFDLPKGDYQLTCWTVPAEKSDLHADTYIIDAVSV

Nucleotide


Download         Length: 399 bp        

>NTDB_id=1090812 ACL6ER_RS00955 WP_133488532.1 197406..197804(-) (nin/comJ) [Bacillus inaquosorum strain SY1167]
TTGATCAAGTCATGGAAGCCGCAAGAACTGTCGATTTCATATCATCAATTTACTGTATTTCAAAAGGATTCCGCACCTCC
TGTCATGGATTGGACTGACGAAGCGATTGAAAAAGGATATGCTGCGGAGGACGGAGCAATTTCCTTTGAGGCTCAGAGAA
ATACAAAGGCATTTATTCTTTTGCGCCTTAACAGTTCAGAAACTGTAAACTCCTACGAAAAAAAAGTGACTGTTCCTTTT
CATGTCACAGAAAACGGAATTGAGATTGAAAGCATTATGTCTAAAAGGCTGTCCTTTGATCTTCCTAAAGGGGACTATCA
ATTGACATGCTGGACTGTGCCGGCTGAGAAGTCAGATCTACACGCCGACACTTATATTATTGATGCTGTTTCTGTGTAA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

96.212

100

0.962

Multiple sequence alignment