Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | ACL6EQ_RS11860 | Genome accession | NZ_CP178716 |
| Coordinates | 2307722..2308759 (-) | Length | 345 a.a. |
| NCBI ID | WP_185183732.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain SY1483 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2302722..2313759
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACL6EQ_RS11810 (ACL6EQ_11810) | tasA | 2302819..2303604 (-) | 786 | WP_326382994.1 | biofilm matrix protein TasA | - |
| ACL6EQ_RS11815 (ACL6EQ_11815) | sipW | 2303668..2304240 (-) | 573 | WP_003246088.1 | signal peptidase I SipW | - |
| ACL6EQ_RS11820 (ACL6EQ_11820) | tapA | 2304224..2304985 (-) | 762 | WP_024573387.1 | amyloid fiber anchoring/assembly protein TapA | - |
| ACL6EQ_RS11825 (ACL6EQ_11825) | yqzG | 2305258..2305584 (+) | 327 | WP_413358461.1 | YqzG/YhdC family protein | - |
| ACL6EQ_RS11830 (ACL6EQ_11830) | spoIITA | 2305626..2305805 (-) | 180 | WP_003230176.1 | YqzE family protein | - |
| ACL6EQ_RS11835 (ACL6EQ_11835) | comGG | 2305876..2306250 (-) | 375 | WP_144500712.1 | ComG operon protein ComGG | Machinery gene |
| ACL6EQ_RS11840 (ACL6EQ_11840) | comGF | 2306251..2306634 (-) | 384 | WP_185183735.1 | ComG operon protein ComGF | Machinery gene |
| ACL6EQ_RS11845 (ACL6EQ_11845) | comGE | 2306660..2307007 (-) | 348 | WP_185183734.1 | ComG operon protein 5 | Machinery gene |
| ACL6EQ_RS11850 (ACL6EQ_11850) | comGD | 2306991..2307422 (-) | 432 | WP_024573390.1 | comG operon protein ComGD | Machinery gene |
| ACL6EQ_RS11855 (ACL6EQ_11855) | comGC | 2307412..2307708 (-) | 297 | WP_185183733.1 | comG operon protein ComGC | Machinery gene |
| ACL6EQ_RS11860 (ACL6EQ_11860) | comGB | 2307722..2308759 (-) | 1038 | WP_185183732.1 | comG operon protein ComGB | Machinery gene |
| ACL6EQ_RS11865 (ACL6EQ_11865) | comGA | 2308746..2309816 (-) | 1071 | WP_085186492.1 | competence protein ComGA | Machinery gene |
| ACL6EQ_RS11870 (ACL6EQ_11870) | - | 2310078..2310227 (-) | 150 | WP_250622588.1 | hypothetical protein | - |
| ACL6EQ_RS11875 (ACL6EQ_11875) | corA | 2310229..2311182 (-) | 954 | WP_032677123.1 | magnesium transporter CorA | - |
| ACL6EQ_RS11880 (ACL6EQ_11880) | yqhB | 2311325..2312653 (+) | 1329 | WP_003230150.1 | hemolysin family protein | - |
| ACL6EQ_RS11885 (ACL6EQ_11885) | rsbRD | 2312706..2313542 (-) | 837 | WP_413358472.1 | RsbT co-antagonist protein RsbRD | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39772.25 Da Isoelectric Point: 9.6315
>NTDB_id=1090775 ACL6EQ_RS11860 WP_185183732.1 2307722..2308759(-) (comGB) [Bacillus subtilis strain SY1483]
MIKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDTVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFVFF
QHIDLVIILLALFTAGIGIYYWLVFKKKSPARQMLICVRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIEAAICGRPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLLPMYQMMNQM
MIKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDTVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFVFF
QHIDLVIILLALFTAGIGIYYWLVFKKKSPARQMLICVRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIEAAICGRPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLLPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=1090775 ACL6EQ_RS11860 WP_185183732.1 2307722..2308759(-) (comGB) [Bacillus subtilis strain SY1483]
ATGATAAAGATTAGAAAAGTCTGGTCGTTAAAGGATCAAGCCAGGTTATTAAAGCGGCTCGGTGAAATGACTGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATACGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTACTGCGCTATCCGCTTTTCCTCATTTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGTTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTGGCTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTGTCAGGATTCCTTTGGTTGGAAAGCTTGTCAAACTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCGGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAAGCCGCTATTTG
TGGAAGACCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGAGAGCTTT
TCACATACAGCCAGTTCATATTGCAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATTCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTCTTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGATAAAGATTAGAAAAGTCTGGTCGTTAAAGGATCAAGCCAGGTTATTAAAGCGGCTCGGTGAAATGACTGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATACGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTACTGCGCTATCCGCTTTTCCTCATTTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGTTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTGGCTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTGTCAGGATTCCTTTGGTTGGAAAGCTTGTCAAACTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCGGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAAGCCGCTATTTG
TGGAAGACCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGAGAGCTTT
TCACATACAGCCAGTTCATATTGCAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATTCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTCTTGCCTATGTATCAGATGATGAATCAAATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
97.523 |
93.623 |
0.913 |