Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   ACL6EQ_RS05270 Genome accession   NZ_CP178716
Coordinates   1034090..1035241 (+) Length   383 a.a.
NCBI ID   WP_413360413.1    Uniprot ID   -
Organism   Bacillus subtilis strain SY1483     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 1029090..1040241
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACL6EQ_RS05235 (ACL6EQ_05235) yjbB 1029550..1030767 (+) 1218 WP_153255904.1 MFS transporter -
  ACL6EQ_RS05240 (ACL6EQ_05240) yjbC 1030931..1031509 (+) 579 WP_003224597.1 GNAT family N-acetyltransferase -
  ACL6EQ_RS05245 (ACL6EQ_05245) spx 1031690..1032085 (+) 396 WP_014476435.1 transcriptional regulator Spx -
  ACL6EQ_RS05250 (ACL6EQ_05250) yjbE 1032340..1032996 (-) 657 WP_003232944.1 TerC family protein -
  ACL6EQ_RS05255 (ACL6EQ_05255) - 1033166..1033306 (+) 141 WP_119122854.1 hypothetical protein -
  ACL6EQ_RS05260 (ACL6EQ_05260) mecA 1033273..1033929 (+) 657 WP_003245194.1 adaptor protein MecA Regulator
  ACL6EQ_RS05265 (ACL6EQ_05265) - 1033924..1034046 (-) 123 WP_003245684.1 hypothetical protein -
  ACL6EQ_RS05270 (ACL6EQ_05270) coiA 1034090..1035241 (+) 1152 WP_413360413.1 competence protein CoiA Machinery gene
  ACL6EQ_RS05275 (ACL6EQ_05275) pepF 1035471..1037300 (+) 1830 WP_003245178.1 oligoendopeptidase F -
  ACL6EQ_RS05280 (ACL6EQ_05280) - 1037338..1037505 (-) 168 WP_003244944.1 hypothetical protein -
  ACL6EQ_RS05285 (ACL6EQ_05285) spxH 1037820..1038719 (-) 900 WP_024573348.1 protease adaptor protein SpxH -
  ACL6EQ_RS05290 (ACL6EQ_05290) bhbI 1038716..1039114 (-) 399 WP_003232928.1 group 2 truncated hemoglobin YjbI -
  ACL6EQ_RS05295 (ACL6EQ_05295) cwlQ 1039366..1040100 (-) 735 WP_017695685.1 bifunctional muramidase/murein lytic transglycosylase -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 44973.02 Da        Isoelectric Point: 9.8767

>NTDB_id=1090753 ACL6EQ_RS05270 WP_413360413.1 1034090..1035241(+) (coiA) [Bacillus subtilis strain SY1483]
MFSAVTEDGQLFHLLGAQQNQKLKRRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCSIDIEPESAYHLEGKRQLYVWLK
TQRASPILEPYIRTINQRPDVMARIKEHMLAVEYQCATIAPDVFHKRTEGFKQEGIIPQWIMGYSRLKRTASSFYQFSAF
HWQFINASPYRELICYCPERRSFLRLSHIIPFYTNHSYSSVQTIPIHRAGADDLFFTEPKPSIQYSGWTKAIHRFRHKPH
RFNSKETNRLRLLFYEKRQTPFSFLPTEVFVPVRKGAVFKSPVFVWQGFLYLFMTDLGDKRAPIRFSAVLQQCKLHIHNK
NIALRFECSEECLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPTGGIHSMQDLIERDRSCFIE

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=1090753 ACL6EQ_RS05270 WP_413360413.1 1034090..1035241(+) (coiA) [Bacillus subtilis strain SY1483]
TTGTTTAGTGCTGTGACTGAAGACGGCCAACTGTTTCACCTTCTAGGTGCTCAGCAAAACCAGAAATTAAAGCGGAGACG
GTTCTTCTGTCCGGTATGCGGGGGAGAGCTAGCTGTGAAGCTCGGACTTCAAAAAGCGCCGCATTTTGCCCATAAACAGA
ACAAGTCCTGCTCCATAGACATCGAACCGGAAAGCGCCTACCACTTAGAAGGAAAAAGACAGCTGTATGTATGGCTGAAA
ACACAACGGGCTTCACCAATATTGGAGCCGTATATAAGGACAATCAACCAAAGACCGGACGTCATGGCAAGGATCAAGGA
GCATATGCTTGCTGTTGAATATCAATGCGCCACTATCGCTCCAGATGTCTTTCACAAGCGGACAGAGGGCTTCAAACAAG
AAGGAATCATCCCGCAGTGGATTATGGGATACAGCCGCTTAAAACGGACTGCTTCGTCCTTTTATCAGTTTTCAGCTTTT
CATTGGCAGTTTATCAATGCAAGTCCATACAGAGAGCTGATATGTTATTGTCCTGAAAGGCGTTCTTTTCTCCGGCTCAG
CCACATCATTCCATTCTATACAAACCATTCTTATTCCTCAGTCCAAACGATCCCTATCCATCGGGCAGGTGCAGACGATC
TTTTTTTCACTGAACCGAAACCCTCAATTCAATATTCAGGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCCCAT
CGGTTTAACTCAAAGGAAACAAATCGCCTTAGGCTGCTGTTTTATGAGAAGCGACAGACACCTTTTTCTTTTCTGCCGAC
TGAAGTGTTTGTTCCTGTTAGAAAAGGGGCAGTTTTTAAGAGTCCGGTTTTTGTGTGGCAGGGGTTTCTTTATTTGTTTA
TGACGGATCTTGGAGATAAACGTGCGCCAATTCGTTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACATTCATAATAAG
AACATTGCACTCAGGTTCGAATGCAGCGAAGAGTGTCTTTCAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAA
GGGATTTTTAAGGGAGACTCAGAAAGAAGTATATGTGCTGAATCAGCCTACAGGCGGCATACACTCCATGCAGGATCTCA
TAGAAAGAGACCGCAGCTGTTTTATAGAATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

97.587

97.389

0.95


Multiple sequence alignment