Detailed information NTG1090447

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: ACKUFW_RS01970
• Genome accession: NZ_CP178610
• Coordinates: 388072..389220 (+)
• Length: 382 a.a.
• NCBI ID: WP_003156336.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain GUMHT p116
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 383072..394220

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACKUFW_RS01950 (ACKUFW_01950)	-	383469..384152 (-)	684	WP_202735837.1	ABC transporter ATP-binding protein	-
ACKUFW_RS01955 (ACKUFW_01955)	-	384167..385603 (-)	1437	WP_166706408.1	ABC transporter permease	-
ACKUFW_RS01960 (ACKUFW_01960)	-	385816..386499 (+)	684	WP_007410267.1	response regulator transcription factor	-
ACKUFW_RS01965 (ACKUFW_01965)	-	386486..387919 (+)	1434	WP_182069772.1	sensor histidine kinase	-
ACKUFW_RS01970 (ACKUFW_01970)	rapC	388072..389220 (+)	1149	WP_003156336.1	Rap family tetratricopeptide repeat protein	Regulator
ACKUFW_RS01975 (ACKUFW_01975)	phrC	389204..389323 (+)	120	WP_003156334.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
ACKUFW_RS01980 (ACKUFW_01980)	-	389473..389583 (-)	111	WP_369719092.1	YjcZ family sporulation protein	-
ACKUFW_RS01985 (ACKUFW_01985)	-	389663..391027 (-)	1365	WP_020955323.1	aspartate kinase	-
ACKUFW_RS01990 (ACKUFW_01990)	ceuB	391441..392394 (+)	954	WP_003156332.1	ABC transporter permease	Machinery gene
ACKUFW_RS01995 (ACKUFW_01995)	-	392384..393331 (+)	948	WP_003156331.1	iron chelate uptake ABC transporter family permease subunit	-
ACKUFW_RS02000 (ACKUFW_02000)	-	393325..394083 (+)	759	WP_071392129.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45521.82 Da
• Isoelectric Point: 5.0732

>NTDB_id=1090447 ACKUFW_RS01970 WP_003156336.1 388072..389220(+) (rapC) [Bacillus velezensis strain GUMHT p116]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDRMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEEK
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=1090447 ACKUFW_RS01970 WP_003156336.1 388072..389220(+) (rapC) [Bacillus velezensis strain GUMHT p116]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCGTATGGAGCCTGATTCAAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATATCAGCGATTACGTATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAAGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTTGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGACGAGGAAAAA
ATCAGCGCATGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAGATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.199	100	0.822
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568