Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | ACJQW4_RS15295 | Genome accession | NZ_CP178606 |
| Coordinates | 3226135..3226506 (-) | Length | 123 a.a. |
| NCBI ID | WP_241625035.1 | Uniprot ID | - |
| Organism | Acinetobacter sp. A7.4 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3221135..3231506
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACJQW4_RS15265 (ACJQW4_15265) | tadA | 3221419..3221931 (-) | 513 | WP_241625048.1 | tRNA adenosine(34) deaminase TadA | - |
| ACJQW4_RS15270 (ACJQW4_15270) | - | 3221936..3223060 (-) | 1125 | WP_100242423.1 | enoyl-CoA hydratase/isomerase family protein | - |
| ACJQW4_RS15275 (ACJQW4_15275) | ung | 3223057..3223770 (-) | 714 | WP_241625046.1 | uracil-DNA glycosylase | - |
| ACJQW4_RS15280 (ACJQW4_15280) | - | 3223813..3224409 (-) | 597 | WP_241625043.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| ACJQW4_RS15285 (ACJQW4_15285) | gspK | 3224518..3225465 (-) | 948 | WP_241625041.1 | type II secretion system minor pseudopilin GspK | - |
| ACJQW4_RS15290 (ACJQW4_15290) | xcpW | 3225506..3226132 (-) | 627 | WP_281070017.1 | type II secretion system protein GspJ | Machinery gene |
| ACJQW4_RS15295 (ACJQW4_15295) | xcpV | 3226135..3226506 (-) | 372 | WP_241625035.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| ACJQW4_RS15300 (ACJQW4_15300) | - | 3226496..3227065 (-) | 570 | WP_241625032.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| ACJQW4_RS15305 (ACJQW4_15305) | - | 3227081..3227680 (-) | 600 | WP_241625030.1 | TetR/AcrR family transcriptional regulator | - |
| ACJQW4_RS15310 (ACJQW4_15310) | - | 3227735..3228508 (-) | 774 | WP_241625028.1 | TatD family hydrolase | - |
| ACJQW4_RS15315 (ACJQW4_15315) | - | 3228533..3228874 (-) | 342 | WP_241625026.1 | PilZ domain-containing protein | - |
| ACJQW4_RS15320 (ACJQW4_15320) | - | 3228887..3229873 (-) | 987 | WP_241625323.1 | DNA polymerase III subunit delta' | - |
| ACJQW4_RS15325 (ACJQW4_15325) | kdsB | 3229886..3230647 (-) | 762 | WP_241625023.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 123 a.a. Molecular weight: 13703.73 Da Isoelectric Point: 9.7687
>NTDB_id=1090421 ACJQW4_RS15295 WP_241625035.1 3226135..3226506(-) (xcpV) [Acinetobacter sp. A7.4]
MKSKGFTLLEVMVALAIFATAAMALTKVAMQYTQATAQAILRTKAQFLAQNEIAKMQIKGEWLEGTQSEQLSQQGEHWQV
EKSAQSTISPNVQRVEIQVRLFNTETGKAESGVTHLVFFNNRT
MKSKGFTLLEVMVALAIFATAAMALTKVAMQYTQATAQAILRTKAQFLAQNEIAKMQIKGEWLEGTQSEQLSQQGEHWQV
EKSAQSTISPNVQRVEIQVRLFNTETGKAESGVTHLVFFNNRT
Nucleotide
Download Length: 372 bp
>NTDB_id=1090421 ACJQW4_RS15295 WP_241625035.1 3226135..3226506(-) (xcpV) [Acinetobacter sp. A7.4]
ATGAAATCTAAAGGGTTTACATTATTGGAAGTCATGGTTGCGCTGGCAATATTTGCAACTGCTGCAATGGCTTTAACCAA
AGTGGCGATGCAATATACACAGGCAACTGCACAGGCAATTTTACGAACCAAAGCACAATTTCTGGCACAAAATGAAATCG
CCAAAATGCAAATTAAAGGTGAATGGCTGGAAGGAACGCAATCTGAACAGTTGTCGCAACAAGGTGAGCACTGGCAGGTA
GAAAAAAGTGCGCAATCGACCATTAGTCCAAATGTACAACGGGTCGAAATACAGGTACGTTTATTTAATACAGAAACGGG
TAAGGCTGAATCAGGTGTTACACATTTGGTCTTTTTTAATAATAGAACATGA
ATGAAATCTAAAGGGTTTACATTATTGGAAGTCATGGTTGCGCTGGCAATATTTGCAACTGCTGCAATGGCTTTAACCAA
AGTGGCGATGCAATATACACAGGCAACTGCACAGGCAATTTTACGAACCAAAGCACAATTTCTGGCACAAAATGAAATCG
CCAAAATGCAAATTAAAGGTGAATGGCTGGAAGGAACGCAATCTGAACAGTTGTCGCAACAAGGTGAGCACTGGCAGGTA
GAAAAAAGTGCGCAATCGACCATTAGTCCAAATGTACAACGGGTCGAAATACAGGTACGTTTATTTAATACAGAAACGGG
TAAGGCTGAATCAGGTGTTACACATTTGGTCTTTTTTAATAATAGAACATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
70.833 |
97.561 |
0.691 |