Detailed information    

insolico Bioinformatically predicted

Overview

Name   tonB2   Type   Machinery gene
Locus tag   ACJQW4_RS07235 Genome accession   NZ_CP178606
Coordinates   1534635..1535516 (+) Length   293 a.a.
NCBI ID   WP_241629414.1    Uniprot ID   -
Organism   Acinetobacter sp. A7.4     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1529635..1540516
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACJQW4_RS07210 (ACJQW4_07210) - 1530247..1530615 (-) 369 WP_241629424.1 hypothetical protein -
  ACJQW4_RS07215 (ACJQW4_07215) - 1530865..1531926 (-) 1062 WP_241629422.1 sensor domain-containing diguanylate cyclase -
  ACJQW4_RS07220 (ACJQW4_07220) - 1532170..1532745 (-) 576 WP_241629420.1 xanthine phosphoribosyltransferase -
  ACJQW4_RS07225 (ACJQW4_07225) - 1532836..1533549 (-) 714 WP_241629418.1 DUF3108 domain-containing protein -
  ACJQW4_RS07230 (ACJQW4_07230) - 1533714..1534397 (-) 684 WP_241629416.1 hypothetical protein -
  ACJQW4_RS07235 (ACJQW4_07235) tonB2 1534635..1535516 (+) 882 WP_241629414.1 energy transducer TonB Machinery gene
  ACJQW4_RS07240 (ACJQW4_07240) - 1535605..1535907 (-) 303 WP_241629413.1 antibiotic biosynthesis monooxygenase family protein -
  ACJQW4_RS07245 (ACJQW4_07245) ybeY 1535981..1536463 (-) 483 WP_241629411.1 rRNA maturation RNase YbeY -
  ACJQW4_RS07250 (ACJQW4_07250) - 1536482..1537558 (-) 1077 WP_241629409.1 PhoH family protein -
  ACJQW4_RS07255 (ACJQW4_07255) miaB 1537598..1539052 (-) 1455 WP_241629407.1 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB -
  ACJQW4_RS07260 (ACJQW4_07260) - 1539084..1539266 (+) 183 WP_241629405.1 hypothetical protein -

Sequence

Protein


Download         Length: 293 a.a.        Molecular weight: 33708.61 Da        Isoelectric Point: 9.6315

>NTDB_id=1090410 ACJQW4_RS07235 WP_241629414.1 1534635..1535516(+) (tonB2) [Acinetobacter sp. A7.4]
MILNKINYTPLLRAWWKDPIFTTAVVFALIVHLLVLAIEFTAPTQHDATVKEIAVTLRPSEKKVEHADFLAQADQQGSGT
FREAHRMSSDMPAPMLEQSAGEKQMETLEKTQQKRELNFEEKVLMTTLSWQKQAEQNRRKKAMEELNSQFQAKAAMVASL
EAQYLQRQQNFSRQQKIKTVDGIQAKQDISAAYLEKFREKVEFYGNRYYPEQAKQQRLAGEVRLMVILNRNGGIRAIRLI
ESSGHDLLDEAAKASVRKAAPFTAFDSKMKDISELRIVRTWRFDPAEAEFEVQ

Nucleotide


Download         Length: 882 bp        

>NTDB_id=1090410 ACJQW4_RS07235 WP_241629414.1 1534635..1535516(+) (tonB2) [Acinetobacter sp. A7.4]
ATGATCCTGAATAAAATAAATTATACGCCTTTGTTACGTGCTTGGTGGAAAGATCCGATTTTTACTACGGCGGTGGTTTT
TGCCCTGATTGTACATCTTTTGGTTTTAGCTATCGAATTTACTGCACCTACCCAACACGATGCTACCGTGAAAGAAATTG
CAGTGACCTTGCGTCCGAGCGAGAAAAAAGTTGAGCATGCCGATTTTCTGGCACAGGCGGATCAACAAGGCTCTGGAACT
TTTCGTGAAGCACACCGTATGTCTAGTGACATGCCTGCACCAATGCTGGAGCAGAGTGCAGGTGAAAAACAGATGGAGAC
GCTGGAAAAAACACAACAAAAACGTGAATTGAATTTTGAAGAAAAAGTCTTGATGACCACGCTGAGTTGGCAGAAACAAG
CAGAACAAAATCGTCGTAAAAAGGCGATGGAAGAGCTGAATAGTCAGTTCCAAGCCAAAGCGGCCATGGTGGCAAGTTTA
GAAGCACAGTATTTACAGCGTCAGCAAAACTTTAGCCGCCAACAAAAAATTAAAACTGTGGATGGCATTCAAGCCAAGCA
GGACATTTCGGCTGCCTATTTAGAAAAATTCAGAGAAAAAGTCGAGTTTTATGGCAATCGTTACTACCCAGAACAAGCCA
AACAACAACGCTTGGCTGGTGAAGTGCGCTTGATGGTGATTTTGAACCGTAATGGTGGGATTCGTGCCATTCGTTTAATT
GAAAGCTCTGGTCATGATTTGCTTGATGAAGCAGCCAAGGCTTCGGTACGGAAAGCTGCACCATTTACGGCATTTGATAG
CAAGATGAAGGATATTTCAGAATTGCGCATTGTCCGAACTTGGCGTTTTGACCCTGCAGAAGCTGAGTTCGAAGTGCAGT
AA

Domains

Predicted by InterproScan.

Gram-negative bacterial TonB protein C-terminal (TonB_C)

(206-283)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

74.194

95.222

0.706

Multiple sequence alignment