Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   ACJGE3_RS15925 Genome accession   NZ_CP178562
Coordinates   3215351..3215749 (-) Length   132 a.a.
NCBI ID   WP_043866822.1    Uniprot ID   -
Organism   Bacillus velezensis strain JT-3     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 3210351..3220749
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACJGE3_RS15890 (ACJGE3_15890) - 3211365..3211493 (-) 129 Protein_3093 hypothetical protein -
  ACJGE3_RS15895 (ACJGE3_15895) - 3211638..3212840 (+) 1203 WP_369614624.1 GTP-binding protein -
  ACJGE3_RS15900 (ACJGE3_15900) - 3212905..3214041 (+) 1137 WP_077721769.1 zinc-dependent alcohol dehydrogenase -
  ACJGE3_RS15905 (ACJGE3_15905) - 3214056..3214490 (+) 435 WP_369614625.1 RDD family protein -
  ACJGE3_RS15910 (ACJGE3_15910) - 3214608..3214883 (+) 276 WP_369719109.1 YckD family protein -
  ACJGE3_RS15915 (ACJGE3_15915) - 3214987..3215178 (+) 192 WP_071392145.1 family 1 glycosylhydrolase -
  ACJGE3_RS15920 (ACJGE3_15920) - 3215103..3215332 (+) 230 Protein_3099 family 1 glycosylhydrolase -
  ACJGE3_RS15925 (ACJGE3_15925) nin/comJ 3215351..3215749 (-) 399 WP_043866822.1 competence protein ComJ Regulator
  ACJGE3_RS15930 (ACJGE3_15930) nucA/comI 3215771..3216208 (-) 438 WP_003156588.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  ACJGE3_RS15935 (ACJGE3_15935) hxlB 3216569..3217126 (-) 558 WP_077721772.1 6-phospho-3-hexuloisomerase -
  ACJGE3_RS15940 (ACJGE3_15940) hxlA 3217123..3217758 (-) 636 WP_369614626.1 3-hexulose-6-phosphate synthase -
  ACJGE3_RS15945 (ACJGE3_15945) - 3217990..3218352 (+) 363 WP_016936795.1 winged helix-turn-helix transcriptional regulator -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 15014.99 Da        Isoelectric Point: 4.6564

>NTDB_id=1090197 ACJGE3_RS15925 WP_043866822.1 3215351..3215749(-) (nin/comJ) [Bacillus velezensis strain JT-3]
MNKSWKPQELAISYHQFTIFQKDSEPPVIDWTDEAIEKGYAEADGAVSFEARRNTRAFIVLRLNTSEPVLSYEKKATVPF
EAVKDGIEIESVMSKRLFFNIPKGRYSLTCYSVPAEISDLHADTYIIDADAM

Nucleotide


Download         Length: 399 bp        

>NTDB_id=1090197 ACJGE3_RS15925 WP_043866822.1 3215351..3215749(-) (nin/comJ) [Bacillus velezensis strain JT-3]
TTGAATAAATCATGGAAACCGCAAGAACTGGCCATTTCTTATCATCAATTTACAATCTTCCAAAAAGATTCAGAACCGCC
TGTTATCGATTGGACCGATGAAGCCATTGAAAAAGGATATGCGGAAGCTGACGGAGCTGTTTCATTTGAAGCAAGGAGAA
ATACGAGGGCATTTATCGTCCTCAGGCTTAACACAAGTGAACCGGTACTATCCTATGAGAAAAAAGCGACTGTTCCCTTT
GAGGCTGTAAAAGATGGAATTGAGATTGAAAGCGTGATGTCAAAGCGGCTTTTCTTTAATATTCCGAAAGGCCGGTACAG
CCTTACCTGTTATTCAGTGCCTGCCGAAATATCCGATCTTCATGCGGATACGTATATTATTGATGCAGACGCAATGTAA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

76.744

97.727

0.75

Multiple sequence alignment