Detailed information
Bioinformatically predicted
Overview
| Name | comK/comK1 | Type | Regulator |
| Locus tag | ACL211_RS08690 | Genome accession | NZ_CP178524 |
| Coordinates | 1854035..1854610 (-) | Length | 191 a.a. |
| NCBI ID | WP_001829272.1 | Uniprot ID | - |
| Organism | Staphylococcus epidermidis strain X15T2 | ||
| Function | promote expression of competence genes (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 1817748..1853498 | 1854035..1854610 | flank | 537 |
Gene organization within MGE regions
Location: 1817748..1854610
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACL211_RS08455 | - | 1817748..1818668 (-) | 921 | WP_413226272.1 | N-acetylmuramoyl-L-alanine amidase family protein | - |
| ACL211_RS08460 | - | 1818721..1819107 (-) | 387 | WP_002446772.1 | phage holin family protein | - |
| ACL211_RS08465 | - | 1819109..1819390 (-) | 282 | WP_002501736.1 | hypothetical protein | - |
| ACL211_RS08470 | - | 1819427..1819837 (-) | 411 | WP_002501735.1 | hypothetical protein | - |
| ACL211_RS08475 | - | 1819858..1823313 (-) | 3456 | WP_002501734.1 | phage tail spike protein | - |
| ACL211_RS08480 | - | 1823310..1824080 (-) | 771 | WP_049392193.1 | tail protein | - |
| ACL211_RS08485 | - | 1824139..1826796 (-) | 2658 | WP_413226274.1 | hypothetical protein | - |
| ACL211_RS08490 | - | 1826789..1828255 (-) | 1467 | WP_413226275.1 | phage tail tape measure protein | - |
| ACL211_RS08495 | - | 1828319..1828519 (-) | 201 | WP_002501730.1 | hypothetical protein | - |
| ACL211_RS08500 | - | 1828585..1828929 (-) | 345 | WP_002501729.1 | hypothetical protein | - |
| ACL211_RS08505 | - | 1828953..1829657 (-) | 705 | WP_002484613.1 | hypothetical protein | - |
| ACL211_RS08510 | - | 1829663..1830100 (-) | 438 | WP_002501727.1 | hypothetical protein | - |
| ACL211_RS08515 | - | 1830100..1830438 (-) | 339 | WP_002501726.1 | hypothetical protein | - |
| ACL211_RS08520 | - | 1830438..1830767 (-) | 330 | WP_002501725.1 | phage head closure protein | - |
| ACL211_RS08525 | - | 1830739..1831047 (-) | 309 | WP_002484579.1 | phage head-tail connector protein | - |
| ACL211_RS08530 | - | 1831074..1832231 (-) | 1158 | WP_002501724.1 | phage major capsid protein | - |
| ACL211_RS08535 | - | 1832256..1833002 (-) | 747 | WP_002501723.1 | head maturation protease, ClpP-related | - |
| ACL211_RS08540 | - | 1833002..1834138 (-) | 1137 | WP_002501722.1 | phage portal protein | - |
| ACL211_RS08545 | - | 1834154..1835788 (-) | 1635 | WP_002501721.1 | terminase TerL endonuclease subunit | - |
| ACL211_RS08550 | - | 1835772..1836110 (-) | 339 | WP_002501720.1 | hypothetical protein | - |
| ACL211_RS08555 | - | 1836430..1836720 (-) | 291 | WP_002501719.1 | HNH endonuclease | - |
| ACL211_RS08560 | - | 1837003..1837614 (-) | 612 | WP_002501718.1 | hypothetical protein | - |
| ACL211_RS08565 | - | 1837818..1838309 (-) | 492 | WP_002501717.1 | sigma factor-like helix-turn-helix DNA-binding protein | - |
| ACL211_RS08570 | - | 1838633..1840507 (-) | 1875 | WP_002501716.1 | phage/plasmid primase, P4 family | - |
| ACL211_RS08575 | - | 1840537..1840731 (-) | 195 | WP_002501715.1 | hypothetical protein | - |
| ACL211_RS08580 | - | 1840810..1841055 (-) | 246 | WP_002501714.1 | hypothetical protein | - |
| ACL211_RS08585 | - | 1841127..1841342 (+) | 216 | WP_002491630.1 | hypothetical protein | - |
| ACL211_RS08590 | - | 1841360..1841662 (-) | 303 | WP_002501713.1 | MazG-like family protein | - |
| ACL211_RS08595 | - | 1841728..1842423 (+) | 696 | WP_002501712.1 | hypothetical protein | - |
| ACL211_RS08600 | - | 1842431..1842820 (-) | 390 | WP_002501711.1 | hypothetical protein | - |
| ACL211_RS08605 | - | 1842828..1842992 (-) | 165 | WP_002486494.1 | DUF3310 domain-containing protein | - |
| ACL211_RS08610 | - | 1843076..1844794 (-) | 1719 | WP_002501710.1 | hypothetical protein | - |
| ACL211_RS08615 | - | 1844844..1845326 (-) | 483 | WP_002501709.1 | DUF669 domain-containing protein | - |
| ACL211_RS08620 | - | 1845378..1845584 (-) | 207 | WP_002501708.1 | hypothetical protein | - |
| ACL211_RS08625 | - | 1845603..1847414 (-) | 1812 | WP_002501707.1 | AAA family ATPase | - |
| ACL211_RS08630 | - | 1847414..1847710 (-) | 297 | WP_002484599.1 | hypothetical protein | - |
| ACL211_RS08635 | - | 1847703..1848020 (-) | 318 | WP_002501706.1 | hypothetical protein | - |
| ACL211_RS08640 | - | 1848023..1849264 (-) | 1242 | WP_413226284.1 | SNF2-related protein | - |
| ACL211_RS08645 | - | 1849412..1849606 (-) | 195 | WP_002491611.1 | DUF1270 family protein | - |
| ACL211_RS08650 | - | 1850091..1850399 (-) | 309 | WP_002501703.1 | DUF771 domain-containing protein | - |
| ACL211_RS08655 | - | 1850453..1850644 (-) | 192 | WP_002501702.1 | helix-turn-helix transcriptional regulator | - |
| ACL211_RS08660 | - | 1850805..1851140 (+) | 336 | WP_002446811.1 | helix-turn-helix domain-containing protein | - |
| ACL211_RS08665 | - | 1851296..1851670 (+) | 375 | WP_002501701.1 | hypothetical protein | - |
| ACL211_RS08670 | - | 1851683..1852357 (+) | 675 | WP_049392317.1 | Ltp family lipoprotein | - |
| ACL211_RS08675 | - | 1852434..1853498 (+) | 1065 | WP_002491600.1 | site-specific integrase | - |
| ACL211_RS08690 | comK/comK1 | 1854035..1854610 (-) | 576 | WP_001829272.1 | competence protein ComK | Regulator |
Sequence
Protein
Download Length: 191 a.a. Molecular weight: 22782.87 Da Isoelectric Point: 9.2887
>NTDB_id=1089881 ACL211_RS08690 WP_001829272.1 1854035..1854610(-) (comK/comK1) [Staphylococcus epidermidis strain X15T2]
MTHLPETIYVIRKGDMVIRPKYDEYQQTNGTEIIRFDQTRKESPFKVQRIIERSCKFYGNNYISKKAETNRITGISSKPP
ILLTPLFPTYFFPTHSDRQEENIWINMHYIENVKELKNRKSKIIFANGDSLTLNVSFHSLWHQYTNAIIYYYMVDKQSRM
KSNNPEQPIDYNQSSLNIFEALSRYSLFEEN
MTHLPETIYVIRKGDMVIRPKYDEYQQTNGTEIIRFDQTRKESPFKVQRIIERSCKFYGNNYISKKAETNRITGISSKPP
ILLTPLFPTYFFPTHSDRQEENIWINMHYIENVKELKNRKSKIIFANGDSLTLNVSFHSLWHQYTNAIIYYYMVDKQSRM
KSNNPEQPIDYNQSSLNIFEALSRYSLFEEN
Nucleotide
Download Length: 576 bp
>NTDB_id=1089881 ACL211_RS08690 WP_001829272.1 1854035..1854610(-) (comK/comK1) [Staphylococcus epidermidis strain X15T2]
ATGACACATTTACCCGAAACGATTTATGTTATACGAAAAGGTGATATGGTAATACGACCTAAATATGATGAATATCAGCA
AACAAATGGTACTGAAATTATCAGATTTGATCAAACTCGCAAAGAAAGTCCATTTAAAGTACAGAGAATTATCGAAAGAT
CATGTAAATTTTATGGTAATAATTATATTAGTAAAAAAGCAGAAACGAATCGTATTACTGGAATCTCTAGTAAACCACCT
ATTTTACTTACGCCTCTTTTTCCTACTTACTTTTTTCCAACTCACTCAGACCGTCAAGAAGAAAATATATGGATTAATAT
GCATTATATTGAAAATGTTAAAGAACTTAAAAATCGTAAGAGTAAAATAATTTTTGCGAATGGTGATTCGTTAACGCTCA
ATGTATCATTTCATAGCTTGTGGCATCAATATACGAATGCAATCATCTATTATTACATGGTAGATAAGCAATCACGAATG
AAATCTAACAACCCTGAACAACCCATTGACTATAATCAGTCTTCTCTAAATATTTTCGAGGCGCTCTCACGCTACTCCCT
TTTTGAAGAAAATTAG
ATGACACATTTACCCGAAACGATTTATGTTATACGAAAAGGTGATATGGTAATACGACCTAAATATGATGAATATCAGCA
AACAAATGGTACTGAAATTATCAGATTTGATCAAACTCGCAAAGAAAGTCCATTTAAAGTACAGAGAATTATCGAAAGAT
CATGTAAATTTTATGGTAATAATTATATTAGTAAAAAAGCAGAAACGAATCGTATTACTGGAATCTCTAGTAAACCACCT
ATTTTACTTACGCCTCTTTTTCCTACTTACTTTTTTCCAACTCACTCAGACCGTCAAGAAGAAAATATATGGATTAATAT
GCATTATATTGAAAATGTTAAAGAACTTAAAAATCGTAAGAGTAAAATAATTTTTGCGAATGGTGATTCGTTAACGCTCA
ATGTATCATTTCATAGCTTGTGGCATCAATATACGAATGCAATCATCTATTATTACATGGTAGATAAGCAATCACGAATG
AAATCTAACAACCCTGAACAACCCATTGACTATAATCAGTCTTCTCTAAATATTTTCGAGGCGCTCTCACGCTACTCCCT
TTTTGAAGAAAATTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comK/comK1 | Staphylococcus aureus MW2 |
76.757 |
96.859 |
0.743 |
| comK/comK1 | Staphylococcus aureus N315 |
76.757 |
96.859 |
0.743 |