Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   ACLZ2J_RS20045 Genome accession   NZ_CP178514
Coordinates   3814603..3814722 (+) Length   39 a.a.
NCBI ID   WP_009968329.1    Uniprot ID   A0A199WEM2
Organism   Bacillus subtilis strain BS18-1     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 3809603..3819722
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLZ2J_RS20020 albG 3809767..3810468 (+) 702 WP_003243391.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -
  ACLZ2J_RS20025 ywhL 3810474..3811850 (-) 1377 WP_003244415.1 YncE family protein -
  ACLZ2J_RS20030 ywhK 3811889..3813244 (-) 1356 WP_003227552.1 YncE family protein -
  ACLZ2J_RS20035 - 3813241..3813471 (-) 231 WP_009968328.1 hypothetical protein -
  ACLZ2J_RS20040 rapF 3813474..3814619 (+) 1146 WP_003227549.1 response regulator aspartate phosphatase RapF Regulator
  ACLZ2J_RS20045 phrF 3814603..3814722 (+) 120 WP_009968329.1 phosphatase RapF inhibitor PhrF Regulator
  ACLZ2J_RS20050 ywhH 3814821..3815294 (+) 474 WP_003227547.1 YbaK/EbsC family protein -
  ACLZ2J_RS20055 speB 3815326..3816198 (-) 873 WP_003227545.1 agmatinase -
  ACLZ2J_RS20060 speE 3816259..3817089 (-) 831 WP_003227543.1 spermidine synthase -
  ACLZ2J_RS20065 pbpG 3817291..3819366 (+) 2076 WP_003227540.1 transglycosylase domain-containing protein -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4199.10 Da        Isoelectric Point: 10.4997

>NTDB_id=1089843 ACLZ2J_RS20045 WP_009968329.1 3814603..3814722(+) (phrF) [Bacillus subtilis strain BS18-1]
MKLKSKLLLSCLALSTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=1089843 ACLZ2J_RS20045 WP_009968329.1 3814603..3814722(+) (phrF) [Bacillus subtilis strain BS18-1]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTAAGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A199WEM2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

100

100

1
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487

Multiple sequence alignment