Detailed information NTG1089771

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: ACLZ2J_RS02160
• Genome accession: NZ_CP178514
• Coordinates: 428370..429518 (+)
• Length: 382 a.a.
• NCBI ID: WP_024571686.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain BS18-1
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 423370..434518

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACLZ2J_RS02140	yclH	423747..424427 (-)	681	WP_014662766.1	ABC transporter ATP-binding protein	-
ACLZ2J_RS02145	yclI	424443..425903 (-)	1461	WP_413155103.1	ABC transporter permease	-
ACLZ2J_RS02150	yclJ	426116..426799 (+)	684	WP_003246532.1	two-component system response regulator YclJ	-
ACLZ2J_RS02155	yclK	426786..428207 (+)	1422	WP_413155104.1	two-component system sensor histidine kinase YclK	-
ACLZ2J_RS02160	rapC	428370..429518 (+)	1149	WP_024571686.1	response regulator aspartate phosphatase RapC	Regulator
ACLZ2J_RS02165	phrC	429502..429624 (+)	123	WP_003224994.1	phosphatase RapC inhibitor PhrC	Regulator
ACLZ2J_RS02170	yczM	429724..429813 (-)	90	WP_015482794.1	YjcZ family sporulation protein	-
ACLZ2J_RS02175	yczN	429895..430008 (-)	114	WP_003234495.1	YjcZ family sporulation protein	-
ACLZ2J_RS02180	thrD	430161..431525 (-)	1365	WP_413155106.1	aspartate kinase	-
ACLZ2J_RS02185	ceuB	431910..432860 (+)	951	WP_262120201.1	petrobactin ABC transporter permease YclN	Machinery gene
ACLZ2J_RS02190	yclO	432853..433800 (+)	948	WP_343515538.1	petrobactin ABC transporter permease YclO	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45591.61 Da
• Isoelectric Point: 5.0364

>NTDB_id=1089771 ACLZ2J_RS02160 WP_024571686.1 428370..429518(+) (rapC) [Bacillus subtilis strain BS18-1]
MKSGVIPSSAVGQKINEWYRYIRTFSVPDAEVLKAEIQQELKHMQHDSNLLLYYSLMEFRHQLMLDYLEPLEKLNIEDQP
SLSELSRNIDSNQADLKGLLDYYVNFFRGMYEFDKREFISAITYYKQAEKKLSFVADHIERAEFYFKIAEAYYYMKQTYF
SLINIKNAYEIYVEQETYNVRIIQCHFVFGVNLMDERNFEQAARHFKLALNMAQAEQKAQLVGRAYYNLGLCYYNQDLLG
PAIDYFEKAVSTFESSRIVNSLPQAYFLITLIYYKQGKHDKASEYHKRGYEYAKETDDADYAVKFEFLQSLYQDQPNEEG
IERCFQYLKNKNMYADIEDLALEVAKYYYEQKWFKLSASYFLQVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=1089771 ACLZ2J_RS02160 WP_024571686.1 428370..429518(+) (rapC) [Bacillus subtilis strain BS18-1]
ATGAAGAGCGGGGTAATTCCTTCTTCAGCGGTCGGTCAAAAAATTAACGAGTGGTACAGATATATCCGGACATTCAGCGT
GCCGGATGCCGAAGTGTTAAAAGCTGAAATCCAGCAGGAACTGAAACACATGCAGCATGATTCCAACTTGCTGCTTTATT
ATTCACTAATGGAATTCCGGCACCAGCTTATGCTGGATTATCTTGAGCCGTTAGAGAAATTAAATATCGAAGACCAGCCA
AGCCTGTCTGAATTATCAAGAAACATTGACAGCAATCAGGCAGATCTCAAAGGGCTGCTCGACTATTACGTGAATTTTTT
TCGCGGGATGTATGAGTTTGATAAGCGGGAATTTATTTCTGCCATTACATACTATAAACAGGCGGAGAAAAAGCTCTCCT
TTGTAGCAGACCATATTGAACGGGCTGAATTCTATTTTAAAATCGCGGAAGCTTATTATTATATGAAGCAAACGTATTTT
TCCTTGATTAATATAAAAAACGCCTATGAAATTTACGTGGAGCAGGAAACCTATAATGTAAGAATCATTCAATGCCATTT
CGTGTTCGGGGTCAACCTGATGGATGAAAGAAATTTCGAACAAGCCGCACGCCATTTCAAATTGGCGCTCAACATGGCCC
AAGCGGAACAAAAAGCCCAGCTGGTCGGAAGAGCATACTACAATCTCGGGTTATGCTATTACAATCAAGACCTTCTAGGC
CCTGCCATTGATTACTTTGAAAAAGCGGTCTCCACGTTTGAAAGCAGCAGGATCGTCAATTCTCTCCCGCAAGCCTATTT
TTTAATCACCCTGATTTATTATAAACAGGGAAAACATGATAAAGCTTCGGAATATCACAAGCGGGGCTATGAATATGCTA
AAGAAACAGACGATGCAGACTATGCCGTAAAATTCGAGTTTTTGCAATCCCTATATCAGGATCAGCCCAATGAAGAAGGA
ATCGAACGATGTTTCCAGTACTTAAAAAATAAAAATATGTACGCTGATATAGAGGATTTAGCCCTAGAAGTAGCAAAATA
TTACTATGAACAGAAATGGTTTAAACTGTCTGCTTCCTACTTTCTACAAGTTGAAGAGGCAAGAAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	99.476	100	0.995
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568