Detailed information NTG0108965

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: GT95_RS10835
• Genome accession: NZ_CP008813
• Coordinates: 2098529..2099638 (+)
• Length: 369 a.a.
• NCBI ID: WP_000264871.1
• Uniprot ID: -
• Organism: Streptococcus agalactiae strain C001
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2093529..2104638

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GT95_RS10810 (GT95_10500)	-	2093901..2094740 (-)	840	WP_000181757.1	energy-coupling factor ABC transporter ATP-binding protein	-
GT95_RS10815 (GT95_10505)	pgsA	2094740..2095282 (-)	543	WP_000239222.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
GT95_RS10820 (GT95_10510)	-	2095405..2096688 (-)	1284	WP_000217765.1	pitrilysin family protein	-
GT95_RS10825 (GT95_10515)	-	2096690..2097934 (-)	1245	WP_000706188.1	pitrilysin family protein	-
GT95_RS10830 (GT95_10520)	yaaA	2098173..2098526 (+)	354	WP_000384867.1	S4 domain-containing protein YaaA	-
GT95_RS10835 (GT95_10525)	recF	2098529..2099638 (+)	1110	WP_000264871.1	DNA replication/repair protein RecF	Machinery gene
GT95_RS10840 (GT95_10530)	-	2099650..2100516 (-)	867	WP_000398683.1	GRP family sugar transporter	-
GT95_RS10845 (GT95_10535)	-	2100572..2101234 (-)	663	WP_088881697.1	helix-turn-helix transcriptional regulator	-
GT95_RS10850 (GT95_10540)	guaB	2101309..2102790 (-)	1482	WP_000073440.1	IMP dehydrogenase	-
GT95_RS10855 (GT95_10545)	-	2102947..2103432 (-)	486	WP_001034427.1	arginine repressor	-
GT95_RS10860 (GT95_10550)	-	2103442..2104122 (-)	681	WP_000628848.1	Crp/Fnr family transcriptional regulator	-

Sequence

Protein

• Length: 369 a.a.
• Molecular weight: 42484.36 Da
• Isoelectric Point: 7.8456

>NTDB_id=108965 GT95_RS10835 WP_000264871.1 2098529..2099638(+) (recF) [Streptococcus agalactiae strain C001]
MWIKNISLKHYRNYEEAQVDFSPNLNIFIGRNAQGKTNFLEAIYFLALTRSHRTRSDKELVHFKHHDVQITGEVIRKSGH
LSLDIQLSEKGRITKVNHLKQAKLSDYIGAMTVVLFAPEDLQLVKGAPSLRRKFLDIDIGQIKPTYLAELSNYNHVLKQR
NTYLKTTNNVDKTFLSVLDEQLADYGSRVIEHRFDFIQALNDEADKHHYIISTELEHLSIHYKSSIEFTDKSSIREHFLN
QLSKSHSRDIFKKNTSIGPHRDDITFFINDINATFGSQGQQRSLILSLKLAEIELIKTVTNDYPILLLDDVMSELDNHRQ
LKLLEGIKKNVQTFITTTSLEHLSALPDQLKIFNISDGTISINEKKATD

Nucleotide

• Length: 1110 bp

>NTDB_id=108965 GT95_RS10835 WP_000264871.1 2098529..2099638(+) (recF) [Streptococcus agalactiae strain C001]
ATGTGGATAAAAAATATTTCTTTAAAACATTATCGTAATTATGAAGAAGCACAAGTAGATTTTTCACCCAACCTCAATAT
TTTCATTGGCCGCAATGCTCAAGGAAAGACAAATTTTTTAGAAGCAATCTACTTCTTGGCTTTGACTCGAAGTCATCGTA
CCCGTTCTGATAAAGAACTTGTACATTTTAAACACCATGATGTACAAATTACAGGTGAGGTAATCCGCAAAAGCGGCCAT
CTTAGCTTAGATATTCAATTATCTGAAAAAGGAAGAATCACTAAGGTTAACCATCTTAAACAGGCAAAATTATCTGATTA
TATTGGGGCTATGACTGTCGTACTTTTTGCCCCTGAAGATCTTCAATTAGTTAAAGGTGCACCTAGCCTAAGACGGAAAT
TTTTAGATATAGATATTGGACAAATTAAGCCAACGTACTTAGCTGAACTTTCAAATTACAATCATGTATTAAAACAAAGA
AACACTTATCTAAAAACTACTAATAACGTCGACAAAACTTTTTTATCAGTCCTTGATGAACAATTAGCTGATTATGGAAG
TCGTGTCATTGAACACCGTTTTGATTTTATCCAAGCCCTAAATGATGAAGCGGACAAGCATCACTACATTATCAGTACTG
AGTTAGAACATTTATCTATTCACTACAAATCGTCAATAGAGTTTACAGATAAGTCAAGTATTAGGGAACATTTTTTAAAC
CAATTATCTAAAAGCCACTCAAGAGACATCTTTAAGAAAAACACAAGCATCGGGCCTCATCGTGATGATATTACTTTCTT
TATTAATGATATCAATGCTACTTTTGGTAGCCAAGGGCAACAAAGAAGCCTTATTTTATCATTGAAATTAGCAGAAATTG
AGCTAATAAAAACCGTTACCAACGATTATCCGATTCTCTTACTTGACGACGTTATGAGTGAACTTGACAACCATCGTCAA
CTAAAACTCTTAGAGGGAATCAAAAAGAATGTTCAAACATTTATTACTACAACAAGTTTAGAACATTTAAGTGCTTTACC
TGATCAACTCAAAATCTTTAACATTAGTGATGGTACTATTAGTATTAATGAAAAAAAAGCAACAGATTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	63.912	98.374	0.629
recF	Bacillus subtilis subsp. subtilis str. 168	44.565	99.729	0.444