Detailed information NTG1089550

Bioinformatically predicted

Overview

• Name: pilY2
• Type: Machinery gene
• Locus tag: ACL000_RS01915
• Genome accession: NZ_CP178412
• Coordinates: 415647..416129 (+)
• Length: 160 a.a.
• NCBI ID: WP_001046415.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain L4793hy
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 410647..421129

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACL000_RS01905 (ACL000_01905)	pilX	410950..411768 (+)	819	WP_000149374.1	PilX N-terminal domain-containing pilus assembly protein	Machinery gene
ACL000_RS01910 (ACL000_01910)	pilY1	411780..415634 (+)	3855	WP_000768956.1	PilC/PilY family type IV pilus protein	Machinery gene
ACL000_RS01915 (ACL000_01915)	pilY2	415647..416129 (+)	483	WP_001046415.1	type IV pilin protein	Machinery gene
ACL000_RS01920 (ACL000_01920)	pilE	416126..416551 (+)	426	WP_000788342.1	type IV pilin protein	Machinery gene
ACL000_RS01925 (ACL000_01925)	rpsP	416698..416949 (+)	252	WP_000260334.1	30S ribosomal protein S16	-
ACL000_RS01930 (ACL000_01930)	rimM	416969..417517 (+)	549	WP_000189236.1	ribosome maturation factor RimM	-
ACL000_RS01935 (ACL000_01935)	trmD	417563..418303 (+)	741	WP_000464599.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	-
ACL000_RS01940 (ACL000_01940)	rplS	418511..418879 (+)	369	WP_000014562.1	50S ribosomal protein L19	-
ACL000_RS01945 (ACL000_01945)	-	418932..419873 (-)	942	WP_086321537.1	lipase family alpha/beta hydrolase	-
ACL000_RS01950 (ACL000_01950)	-	419988..421019 (-)	1032	WP_001189454.1	lipase secretion chaperone	-

Sequence

Protein

• Length: 160 a.a.
• Molecular weight: 17516.77 Da
• Isoelectric Point: 8.4817

>NTDB_id=1089550 ACL000_RS01915 WP_001046415.1 415647..416129(+) (pilY2) [Acinetobacter baumannii strain L4793hy]
MNKYSILRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNAAANGQTWVIKATTTDSRNFNFIAKNSGIRCQSLTATAVDNDCGGTVTCNVCETNSENWQ

Nucleotide

• Length: 483 bp

>NTDB_id=1089550 ACL000_RS01915 WP_001046415.1 415647..416129(+) (pilY2) [Acinetobacter baumannii strain L4793hy]
ATGAATAAGTACTCTATTCTACGGTTCAATCAAGGGGTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGCTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTGGAACAGCATAAATCAAGAAATTTTACTTATAGGGGGTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAGATTACTGATGATACGACGACAGGAAATTTATTGACGAATGCTGCTGCAAATGGGCAAAC
ATGGGTCATTAAAGCGACAACTACAGATTCAAGAAACTTTAATTTTATTGCTAAAAATTCAGGTATACGTTGTCAAAGTT
TAACAGCTACGGCTGTTGATAATGACTGTGGTGGAACAGTCACTTGCAATGTATGTGAAACAAATAGTGAGAATTGGCAA
TGA

Domains

Predicted by InterproScan.

• Type IV minor pilin ComP, DNA uptake sequence receptor (ComP_DUS) (34-115)

• Prokaryotic N-terminal methylation motif (N_methyl) (10-32)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilY2	Acinetobacter baumannii D1279779	97.5	100	0.975
comE	Acinetobacter baylyi ADP1	41.279	100	0.444