Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ACLTDJ_RS01730 Genome accession   NZ_CP178394
Coordinates   356653..357060 (+) Length   135 a.a.
NCBI ID   WP_095019610.1    Uniprot ID   -
Organism   Pseudomonas bubulae strain S31     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 351653..362060
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLTDJ_RS01700 (ACLTDJ_01700) - 351702..352706 (-) 1005 WP_094999859.1 aspartate carbamoyltransferase catalytic subunit -
  ACLTDJ_RS01705 (ACLTDJ_01705) pyrR 352719..353225 (-) 507 WP_094999860.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  ACLTDJ_RS01710 (ACLTDJ_01710) ruvX 353309..353749 (-) 441 WP_088378774.1 Holliday junction resolvase RuvX -
  ACLTDJ_RS01715 (ACLTDJ_01715) - 353749..354321 (-) 573 WP_094999861.1 YqgE/AlgH family protein -
  ACLTDJ_RS01720 (ACLTDJ_01720) - 354476..355375 (-) 900 WP_094999862.1 energy transducer TonB -
  ACLTDJ_RS01725 (ACLTDJ_01725) gshB 355452..356405 (-) 954 WP_094999863.1 glutathione synthase -
  ACLTDJ_RS01730 (ACLTDJ_01730) pilG 356653..357060 (+) 408 WP_095019610.1 twitching motility response regulator PilG Regulator
  ACLTDJ_RS01735 (ACLTDJ_01735) pilH 357102..357479 (+) 378 WP_095019611.1 twitching motility response regulator PilH -
  ACLTDJ_RS01740 (ACLTDJ_01740) - 357490..358029 (+) 540 WP_094999866.1 chemotaxis protein CheW -
  ACLTDJ_RS01745 (ACLTDJ_01745) - 358071..360128 (+) 2058 WP_094999867.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14926.47 Da        Isoelectric Point: 9.1707

>NTDB_id=1089444 ACLTDJ_RS01730 WP_095019610.1 356653..357060(+) (pilG) [Pseudomonas bubulae strain S31]
MEKHSSALKVMVIDDSKTIRRTAETLLKNVGCEVITAIDGFDALAKIVDHHPHIIFVDIMMPRLDGYQTCALIKSNRAFK
SIPVIMLSSKDGLFDKAKGRIVGSDQFLTKPFSRDELLSAIKAHVPAFTITQSAQ

Nucleotide


Download         Length: 408 bp        

>NTDB_id=1089444 ACLTDJ_RS01730 WP_095019610.1 356653..357060(+) (pilG) [Pseudomonas bubulae strain S31]
ATGGAAAAGCATTCCAGCGCCTTGAAGGTGATGGTGATCGACGATTCGAAAACCATTCGCCGCACCGCCGAAACACTGTT
GAAAAACGTGGGCTGCGAGGTGATTACCGCCATCGATGGCTTTGATGCGCTGGCCAAGATTGTCGACCACCACCCGCATA
TTATCTTTGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCCCTGATCAAGAGCAACCGGGCTTTCAAG
TCGATCCCGGTGATCATGTTGTCGTCCAAGGACGGTCTGTTCGACAAGGCCAAGGGGCGGATTGTTGGCTCTGATCAATT
TTTGACCAAGCCCTTCAGTCGCGACGAACTGCTGAGCGCAATCAAGGCACATGTGCCAGCCTTCACTATCACCCAAAGTG
CCCAATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

73.228

94.074

0.689
  vicR Streptococcus mutans UA159

39.683

93.333

0.37

Multiple sequence alignment