Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   ACLN6W_RS05100 Genome accession   NZ_CP178389
Coordinates   1042431..1043708 (+) Length   425 a.a.
NCBI ID   WP_045351393.1    Uniprot ID   -
Organism   Lactiplantibacillus plantarum strain LP45     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1037431..1048708
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLN6W_RS05075 (ACLN6W_05075) tsf 1038328..1039206 (+) 879 WP_003644498.1 translation elongation factor Ts -
  ACLN6W_RS05080 (ACLN6W_05080) pyrH 1039406..1040128 (+) 723 WP_003640737.1 UMP kinase -
  ACLN6W_RS05085 (ACLN6W_05085) frr 1040130..1040693 (+) 564 WP_003640736.1 ribosome recycling factor -
  ACLN6W_RS05090 (ACLN6W_05090) - 1040813..1041592 (+) 780 WP_003640735.1 isoprenyl transferase -
  ACLN6W_RS05095 (ACLN6W_05095) - 1041608..1042393 (+) 786 WP_003640734.1 phosphatidate cytidylyltransferase -
  ACLN6W_RS05100 (ACLN6W_05100) eeP 1042431..1043708 (+) 1278 WP_045351393.1 RIP metalloprotease RseP Regulator
  ACLN6W_RS05105 (ACLN6W_05105) - 1043748..1045457 (+) 1710 WP_045351392.1 proline--tRNA ligase -

Sequence

Protein


Download         Length: 425 a.a.        Molecular weight: 45869.39 Da        Isoelectric Point: 9.5616

>NTDB_id=1089418 ACLN6W_RS05100 WP_045351393.1 1042431..1043708(+) (eeP) [Lactiplantibacillus plantarum strain LP45]
MIVTIITFIIVFGILVIVHEFGHFYFAKKAGILVREFSVGMGPKAVAFRRNATTYTLRFLPIGGYVRMAGVADDEDEELK
PGTPVSLQIGPDGIVHSINASKKTTLFNGIPLSVTATDLEKELWIEGYENGDESEVKHYAVDHDATIVESDGTEVQIAPV
DVQFQSAKLWQRMLTNFAGPMNNFILAIITFAILAFMQGGVTSTTTHVAATTADSVARTAGIQKGDQIVAVNGKKMTSAQ
SISLLIQDSPKQRLTLTINRAGQTKKIAVTPAAKTVSGNRIGQIGVQWVTKTDTSLGAKLAYGFTGSWGITKQIFQVLGR
MVTHGFSLNDLGGPVAIFATTSQAAKSGVRTVIYLLAVLSINLGIVNLLPIPALDGGKLLLNIVEGIRGKPLRVETESVI
TLIGFGLLMLLMILVTWNDIQRYFF

Nucleotide


Download         Length: 1278 bp        

>NTDB_id=1089418 ACLN6W_RS05100 WP_045351393.1 1042431..1043708(+) (eeP) [Lactiplantibacillus plantarum strain LP45]
TTGATCGTTACAATTATTACGTTCATTATCGTTTTCGGAATCTTGGTCATCGTCCATGAATTTGGGCACTTTTACTTTGC
CAAAAAGGCTGGGATTCTAGTGCGTGAATTTTCTGTCGGGATGGGGCCCAAGGCGGTCGCGTTTCGTCGTAATGCAACAA
CTTATACGTTACGGTTTCTGCCAATCGGTGGTTACGTACGGATGGCCGGTGTGGCCGATGATGAAGATGAAGAACTCAAG
CCCGGAACGCCAGTTAGTTTGCAAATTGGTCCGGATGGGATTGTTCATTCAATCAATGCTAGTAAGAAGACAACGTTGTT
CAATGGAATTCCACTGTCAGTGACGGCGACTGATCTCGAAAAAGAACTCTGGATCGAAGGTTATGAGAACGGGGACGAAA
GTGAAGTTAAACACTACGCCGTCGATCATGACGCTACGATCGTTGAAAGCGATGGTACCGAAGTTCAAATTGCACCGGTC
GACGTCCAATTTCAATCGGCCAAGTTATGGCAACGAATGTTGACGAATTTTGCCGGACCGATGAATAACTTCATTTTGGC
CATCATTACATTTGCAATTCTTGCCTTTATGCAGGGTGGTGTTACGAGTACAACGACCCACGTAGCGGCGACGACAGCAG
ACTCAGTTGCCCGTACGGCCGGTATTCAAAAGGGCGATCAAATCGTGGCGGTTAACGGTAAAAAAATGACGAGTGCCCAA
TCGATTTCGCTGTTGATTCAAGACAGCCCGAAGCAACGGTTGACTTTGACCATCAACCGGGCCGGTCAGACTAAAAAAAT
TGCGGTTACCCCTGCTGCCAAGACGGTCTCTGGTAATCGAATCGGTCAAATCGGGGTCCAATGGGTGACTAAGACCGACA
CGAGCCTGGGGGCCAAGTTAGCATACGGCTTTACTGGTTCGTGGGGAATTACCAAACAGATTTTTCAAGTGCTTGGTCGG
ATGGTCACTCACGGGTTCAGTTTGAATGATTTAGGTGGGCCGGTGGCAATCTTTGCCACGACCTCGCAAGCCGCTAAGTC
CGGGGTGCGCACGGTGATTTATTTGCTCGCCGTGCTGTCGATCAACCTTGGAATTGTTAATTTATTACCGATTCCAGCAC
TTGATGGTGGTAAACTATTATTAAACATTGTTGAAGGCATTCGGGGTAAACCACTACGGGTGGAAACGGAAAGTGTCATT
ACCTTGATTGGTTTTGGCCTCCTGATGTTATTAATGATTCTAGTAACTTGGAATGATATTCAGCGATATTTCTTCTAA

Domains

Predicted by InterproScan.

Peptidase family M50 (Peptidase_M50)

(7-411)

PDZ domain (PDZ_6)

(210-260)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

49.065

100

0.494
  eeP Streptococcus thermophilus LMD-9

49.065

100

0.494

Multiple sequence alignment