Detailed information
Bioinformatically predicted
Overview
| Name | pilY2 | Type | Machinery gene |
| Locus tag | ACLOAX_RS13325 | Genome accession | NZ_CP178386 |
| Coordinates | 2784343..2784825 (-) | Length | 160 a.a. |
| NCBI ID | WP_001046420.1 | Uniprot ID | A0A7U3Y2Y6 |
| Organism | Acinetobacter baumannii strain RP15 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2779343..2789825
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACLOAX_RS13290 (ACLOAX_13290) | - | 2779449..2780483 (+) | 1035 | WP_001189447.1 | lipase secretion chaperone | - |
| ACLOAX_RS13295 (ACLOAX_13295) | - | 2780598..2781539 (+) | 942 | WP_085916958.1 | lipase family alpha/beta hydrolase | - |
| ACLOAX_RS13300 (ACLOAX_13300) | rplS | 2781592..2781960 (-) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| ACLOAX_RS13305 (ACLOAX_13305) | trmD | 2782169..2782909 (-) | 741 | WP_000464598.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| ACLOAX_RS13310 (ACLOAX_13310) | rimM | 2782955..2783503 (-) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| ACLOAX_RS13315 (ACLOAX_13315) | rpsP | 2783523..2783774 (-) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| ACLOAX_RS13320 (ACLOAX_13320) | pilE | 2783921..2784346 (-) | 426 | WP_000788342.1 | type IV pilin protein | Machinery gene |
| ACLOAX_RS13325 (ACLOAX_13325) | pilY2 | 2784343..2784825 (-) | 483 | WP_001046420.1 | type IV pilin protein | Machinery gene |
| ACLOAX_RS13330 (ACLOAX_13330) | pilY1 | 2784838..2788692 (-) | 3855 | WP_000768970.1 | PilC/PilY family type IV pilus protein | Machinery gene |
| ACLOAX_RS13335 (ACLOAX_13335) | pilX | 2788704..2789522 (-) | 819 | WP_000149374.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
Sequence
Protein
Download Length: 160 a.a. Molecular weight: 17548.77 Da Isoelectric Point: 8.4817
>NTDB_id=1089334 ACLOAX_RS13325 WP_001046420.1 2784343..2784825(-) (pilY2) [Acinetobacter baumannii strain RP15]
MNKYSILRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNSASNGQTWVIKATTTDSRNFNFIAKNSGLRCQSLTATAVDNDCGGTVTCNVCETNSENWQ
MNKYSILRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNSASNGQTWVIKATTTDSRNFNFIAKNSGLRCQSLTATAVDNDCGGTVTCNVCETNSENWQ
Nucleotide
Download Length: 483 bp
>NTDB_id=1089334 ACLOAX_RS13325 WP_001046420.1 2784343..2784825(-) (pilY2) [Acinetobacter baumannii strain RP15]
ATGAATAAGTACTCTATTCTACGGTTCAATCAAGGGGTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGCTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTAGAACAGCATAAATCAAGAAATTTTACTTATAGGGGTTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAAATTACTGATGATACGACCACAGGTAATTTATTAACAAATTCTGCTTCTAATGGTCAAAC
ATGGGTCATTAAAGCGACAACTACAGATTCAAGAAACTTTAATTTTATTGCTAAGAATTCAGGTTTGCGTTGTCAAAGTT
TAACAGCTACGGCTGTTGATAATGACTGTGGTGGAACAGTCACTTGCAATGTATGTGAAACAAATAGTGAGAATTGGCAA
TGA
ATGAATAAGTACTCTATTCTACGGTTCAATCAAGGGGTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGCTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTAGAACAGCATAAATCAAGAAATTTTACTTATAGGGGTTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAAATTACTGATGATACGACCACAGGTAATTTATTAACAAATTCTGCTTCTAATGGTCAAAC
ATGGGTCATTAAAGCGACAACTACAGATTCAAGAAACTTTAATTTTATTGCTAAGAATTCAGGTTTGCGTTGTCAAAGTT
TAACAGCTACGGCTGTTGATAATGACTGTGGTGGAACAGTCACTTGCAATGTATGTGAAACAAATAGTGAGAATTGGCAA
TGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilY2 | Acinetobacter baumannii D1279779 |
97.5 |
100 |
0.975 |
| comE | Acinetobacter baylyi ADP1 |
40.116 |
100 |
0.431 |