Detailed information
Bioinformatically predicted
Overview
| Name | exbB | Type | Machinery gene |
| Locus tag | ACI766_RS09995 | Genome accession | NZ_CP178323 |
| Coordinates | 2136283..2136918 (+) | Length | 211 a.a. |
| NCBI ID | WP_003091163.1 | Uniprot ID | A0A0H2ZBU7 |
| Organism | Pseudomonas sp. DL | ||
| Function | ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2131283..2141918
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACI766_RS09980 | - | 2131989..2133233 (+) | 1245 | WP_023086056.1 | lipoprotein-releasing ABC transporter permease subunit | - |
| ACI766_RS09985 | - | 2133321..2133854 (-) | 534 | WP_003091165.1 | DUF2062 domain-containing protein | - |
| ACI766_RS09990 | comA | 2133985..2136210 (+) | 2226 | WP_003119806.1 | DNA internalization-related competence protein ComEC/Rec2 | Machinery gene |
| ACI766_RS09995 | exbB | 2136283..2136918 (+) | 636 | WP_003091163.1 | MotA/TolQ/ExbB proton channel family protein | Machinery gene |
| ACI766_RS10000 | - | 2136915..2137355 (+) | 441 | WP_003091161.1 | ExbD/TolR family protein | - |
| ACI766_RS10005 | lpxK | 2137355..2138353 (+) | 999 | WP_031756493.1 | tetraacyldisaccharide 4'-kinase | - |
| ACI766_RS10010 | - | 2138391..2138576 (+) | 186 | WP_003091157.1 | Trm112 family protein | - |
| ACI766_RS10015 | kdsB | 2138576..2139340 (+) | 765 | WP_412828497.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| ACI766_RS10020 | - | 2139340..2139804 (+) | 465 | WP_003106924.1 | low molecular weight protein-tyrosine-phosphatase | - |
| ACI766_RS10025 | murB | 2139801..2140820 (+) | 1020 | WP_023104547.1 | UDP-N-acetylmuramate dehydrogenase | - |
Sequence
Protein
Download Length: 211 a.a. Molecular weight: 22890.06 Da Isoelectric Point: 6.7278
>NTDB_id=1088812 ACI766_RS09995 WP_003091163.1 2136283..2136918(+) (exbB) [Pseudomonas sp. DL]
MWELVQAGGWMMLPIILSSIAATAIVAERLWTLRKSRVAPPELLGQVWKQIKGKQLSAQKLKDLRANSPLGEILAAGLAN
SKHGREIMKECIEEAASGVIHELERYLNALGTIAAMAPLLGLLGTVFGMIQIFGAFMDNGMANSPMLAAGISKALITTAA
GLLVAIPAVFFHRYLLRRVDELVIAMEQEAIKLVEVVQGDREVDYVEEGKA
MWELVQAGGWMMLPIILSSIAATAIVAERLWTLRKSRVAPPELLGQVWKQIKGKQLSAQKLKDLRANSPLGEILAAGLAN
SKHGREIMKECIEEAASGVIHELERYLNALGTIAAMAPLLGLLGTVFGMIQIFGAFMDNGMANSPMLAAGISKALITTAA
GLLVAIPAVFFHRYLLRRVDELVIAMEQEAIKLVEVVQGDREVDYVEEGKA
Nucleotide
Download Length: 636 bp
>NTDB_id=1088812 ACI766_RS09995 WP_003091163.1 2136283..2136918(+) (exbB) [Pseudomonas sp. DL]
GTGTGGGAACTGGTTCAAGCCGGCGGCTGGATGATGCTGCCGATCATTCTGAGTTCGATCGCCGCCACCGCCATCGTCGC
GGAGCGCCTGTGGACGCTGCGCAAGAGCCGCGTCGCGCCGCCCGAGCTGCTCGGCCAGGTGTGGAAGCAGATCAAGGGCA
AGCAACTGAGCGCCCAGAAGCTCAAGGACCTGCGCGCCAACTCGCCGCTGGGAGAGATCCTCGCCGCCGGTCTGGCCAAC
TCCAAGCACGGTCGCGAGATCATGAAGGAGTGCATCGAGGAGGCTGCTTCCGGTGTCATCCACGAGCTGGAGCGCTACCT
CAACGCCCTCGGCACCATCGCCGCGATGGCGCCGCTGCTGGGCCTGCTGGGTACGGTGTTCGGCATGATCCAGATCTTCG
GCGCCTTCATGGACAACGGCATGGCCAACTCGCCGATGCTCGCCGCGGGCATCTCCAAGGCATTGATCACCACCGCCGCC
GGCCTGCTGGTGGCGATTCCGGCGGTGTTCTTCCATCGCTACCTGCTGCGGCGGGTCGACGAACTGGTGATCGCCATGGA
GCAGGAGGCCATCAAGCTGGTGGAAGTGGTGCAGGGCGATCGTGAAGTCGACTACGTCGAGGAAGGCAAAGCGTGA
GTGTGGGAACTGGTTCAAGCCGGCGGCTGGATGATGCTGCCGATCATTCTGAGTTCGATCGCCGCCACCGCCATCGTCGC
GGAGCGCCTGTGGACGCTGCGCAAGAGCCGCGTCGCGCCGCCCGAGCTGCTCGGCCAGGTGTGGAAGCAGATCAAGGGCA
AGCAACTGAGCGCCCAGAAGCTCAAGGACCTGCGCGCCAACTCGCCGCTGGGAGAGATCCTCGCCGCCGGTCTGGCCAAC
TCCAAGCACGGTCGCGAGATCATGAAGGAGTGCATCGAGGAGGCTGCTTCCGGTGTCATCCACGAGCTGGAGCGCTACCT
CAACGCCCTCGGCACCATCGCCGCGATGGCGCCGCTGCTGGGCCTGCTGGGTACGGTGTTCGGCATGATCCAGATCTTCG
GCGCCTTCATGGACAACGGCATGGCCAACTCGCCGATGCTCGCCGCGGGCATCTCCAAGGCATTGATCACCACCGCCGCC
GGCCTGCTGGTGGCGATTCCGGCGGTGTTCTTCCATCGCTACCTGCTGCGGCGGGTCGACGAACTGGTGATCGCCATGGA
GCAGGAGGCCATCAAGCTGGTGGAAGTGGTGCAGGGCGATCGTGAAGTCGACTACGTCGAGGAAGGCAAAGCGTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| exbB | Pseudomonas stutzeri DSM 10701 |
81.043 |
100 |
0.81 |