Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ACI766_RS02050 Genome accession   NZ_CP178323
Coordinates   441276..441683 (+) Length   135 a.a.
NCBI ID   WP_003084583.1    Uniprot ID   A0A0H2ZL28
Organism   Pseudomonas sp. DL     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 436276..446683
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACI766_RS02020 - 436324..437328 (-) 1005 WP_017148568.1 aspartate carbamoyltransferase catalytic subunit -
  ACI766_RS02025 pyrR 437352..437864 (-) 513 WP_003084574.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  ACI766_RS02030 ruvX 437976..438410 (-) 435 WP_003084575.1 Holliday junction resolvase RuvX -
  ACI766_RS02035 - 438410..438979 (-) 570 WP_003100947.1 YqgE/AlgH family protein -
  ACI766_RS02040 - 439028..439921 (-) 894 WP_003162015.1 energy transducer TonB -
  ACI766_RS02045 gshB 440068..441021 (-) 954 WP_003100943.1 glutathione synthase -
  ACI766_RS02050 pilG 441276..441683 (+) 408 WP_003084583.1 twitching motility response regulator PilG Regulator
  ACI766_RS02055 pilH 441730..442095 (+) 366 WP_003084587.1 twitching motility response regulator PilH -
  ACI766_RS02060 - 442146..442682 (+) 537 WP_003084590.1 chemotaxis protein CheW -
  ACI766_RS02065 pilJ 442767..444815 (+) 2049 WP_003100940.1 chemotaxis chemoreceptor PilJ -
  ACI766_RS02070 pilK 444876..445751 (+) 876 WP_023086908.1 type 4 fimbrial methyltransferase PilK -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14718.11 Da        Isoelectric Point: 7.1340

>NTDB_id=1088803 ACI766_RS02050 WP_003084583.1 441276..441683(+) (pilG) [Pseudomonas sp. DL]
MEQQSDGLKVMVIDDSKTIRRTAETLLKKVGCDVITAIDGFDALAKIADTHPNIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPSFTPVDAVS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=1088803 ACI766_RS02050 WP_003084583.1 441276..441683(+) (pilG) [Pseudomonas sp. DL]
ATGGAACAGCAATCCGACGGTTTGAAAGTGATGGTGATCGACGATTCGAAAACGATTCGTCGCACCGCCGAAACACTGCT
GAAAAAGGTCGGTTGCGACGTGATCACGGCAATCGACGGCTTCGATGCCCTGGCGAAGATCGCCGATACCCATCCGAACA
TCATTTTCGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCCCTGATCAAGAACAACAGCGCGTTCAAG
TCCACCCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGCTCCGACCAGTA
CCTCACCAAGCCGTTCAGCAAGGAAGAGCTGCTGGGCGCGATCAAGGCACACGTACCCAGCTTCACCCCGGTGGACGCCG
TTTCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2ZL28

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.803

94.074

0.704
  vicR Streptococcus mutans UA159

44.444

86.667

0.385

Multiple sequence alignment