Detailed information
Bioinformatically predicted
Overview
| Name | fimU | Type | Machinery gene |
| Locus tag | ACLUR6_RS01555 | Genome accession | NZ_CP178250 |
| Coordinates | 338502..338975 (+) | Length | 157 a.a. |
| NCBI ID | WP_168726697.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain ACI | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 333502..343975
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACLUR6_RS01530 (ACLUR6_01530) | - | 333966..336071 (-) | 2106 | WP_168726696.1 | RelA/SpoT family protein | - |
| ACLUR6_RS01535 (ACLUR6_01535) | - | 336111..336240 (-) | 130 | Protein_293 | hypothetical protein | - |
| ACLUR6_RS01540 (ACLUR6_01540) | rpoZ | 336279..336557 (-) | 279 | WP_000135049.1 | DNA-directed RNA polymerase subunit omega | - |
| ACLUR6_RS01545 (ACLUR6_01545) | gmk | 336630..337259 (-) | 630 | WP_000015937.1 | guanylate kinase | - |
| ACLUR6_RS01550 (ACLUR6_01550) | ispH | 337382..338332 (+) | 951 | WP_000407064.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| ACLUR6_RS01555 (ACLUR6_01555) | fimU | 338502..338975 (+) | 474 | WP_168726697.1 | pilus assembly FimT family protein | Machinery gene |
| ACLUR6_RS01560 (ACLUR6_01560) | pilV | 338969..339529 (+) | 561 | WP_002194578.1 | type IV pilus modification protein PilV | Machinery gene |
| ACLUR6_RS01565 (ACLUR6_01565) | pilW | 339530..340531 (+) | 1002 | WP_000079197.1 | PilW family protein | Machinery gene |
| ACLUR6_RS01570 (ACLUR6_01570) | pilX | 340528..341346 (+) | 819 | WP_000149374.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
Sequence
Protein
Download Length: 157 a.a. Molecular weight: 16809.38 Da Isoelectric Point: 8.5355
>NTDB_id=1088682 ACLUR6_RS01555 WP_168726697.1 338502..338975(+) (fimU) [Acinetobacter baumannii strain ACI]
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLESKRLDANQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWQTASNNTLELKNIAADGTQSSLTTTTLAFNANGVVANITQDTLLSICNSRINKKKAIILTKLGTLVFKAEETC
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLESKRLDANQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWQTASNNTLELKNIAADGTQSSLTTTTLAFNANGVVANITQDTLLSICNSRINKKKAIILTKLGTLVFKAEETC
Nucleotide
Download Length: 474 bp
>NTDB_id=1088682 ACLUR6_RS01555 WP_168726697.1 338502..338975(+) (fimU) [Acinetobacter baumannii strain ACI]
ATGAGGGGAATTATTCCGCAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCGGTCATGGCTATTATTGCACT
GATGGCTGCACCATCAATGTCAAATTTATTAGAAAGTAAACGTTTAGATGCTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGACGTCAGAATGTTTCTGTTAACTTGAACTCAACAGCTTCAAATACACCCACG
TCATTAAATTGGCAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGATGGTACGCAAAGTTCTTTAAC
GACTACCACTTTAGCTTTTAACGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTCTA
GAATAAATAAAAAGAAAGCCATTATTTTGACCAAGCTTGGCACTTTAGTTTTTAAGGCCGAGGAGACTTGTTAA
ATGAGGGGAATTATTCCGCAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCGGTCATGGCTATTATTGCACT
GATGGCTGCACCATCAATGTCAAATTTATTAGAAAGTAAACGTTTAGATGCTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGACGTCAGAATGTTTCTGTTAACTTGAACTCAACAGCTTCAAATACACCCACG
TCATTAAATTGGCAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGATGGTACGCAAAGTTCTTTAAC
GACTACCACTTTAGCTTTTAACGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTCTA
GAATAAATAAAAAGAAAGCCATTATTTTGACCAAGCTTGGCACTTTAGTTTTTAAGGCCGAGGAGACTTGTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimU | Acinetobacter baumannii D1279779 |
99.363 |
100 |
0.994 |