Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   ACLII2_RS20205 Genome accession   NZ_CP178213
Coordinates   3845299..3845697 (+) Length   132 a.a.
NCBI ID   WP_003246342.1    Uniprot ID   A0AAE2SGH7
Organism   Bacillus subtilis subsp. subtilis strain BM107     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 3840299..3850697
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLII2_RS20180 hxlR 3841033..3841395 (-) 363 WP_003246265.1 transcriptional activator HxlR -
  ACLII2_RS20185 hxlA 3841628..3842260 (+) 633 WP_003246452.1 3-hexulose-6-phosphate synthase -
  ACLII2_RS20190 hxlB 3842266..3842823 (+) 558 WP_003246343.1 6-phospho-3-hexuloisomerase -
  ACLII2_RS20195 tlpC 3842934..3844655 (+) 1722 WP_003246498.1 methyl-accepting chemotaxis protein TlpC -
  ACLII2_RS20200 nucA/comI 3844823..3845272 (+) 450 WP_003246436.1 DNA-entry nuclease Machinery gene
  ACLII2_RS20205 nin/comJ 3845299..3845697 (+) 399 WP_003246342.1 DNA-entry nuclease inhibitor Regulator
  ACLII2_RS20210 bglC 3845734..3847167 (-) 1434 WP_003246242.1 6-phospho-beta-glucosidase -
  ACLII2_RS20215 yckD 3847321..3847653 (-) 333 WP_003246247.1 YckD family protein -
  ACLII2_RS20220 yckC 3847735..3848190 (-) 456 WP_003246356.1 RDD family protein -
  ACLII2_RS20225 - 3848209..3848406 (-) 198 WP_119122841.1 hypothetical protein -
  ACLII2_RS20230 yckB 3848568..3849431 (+) 864 WP_009966510.1 transporter substrate-binding domain-containing protein -
  ACLII2_RS20235 yckA 3849441..3850121 (+) 681 WP_003234624.1 amino acid ABC transporter permease -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14996.95 Da        Isoelectric Point: 4.8991

>NTDB_id=1088341 ACLII2_RS20205 WP_003246342.1 3845299..3845697(+) (nin/comJ) [Bacillus subtilis subsp. subtilis strain BM107]
MIKSWKPQELSISYHQFTVFQKDSTPPVMDWTDEAIEKGYAAADGAISFEAQRNTKAFILFRLNSSETVNSYEKKVTVPF
HVTENGIHIESIMSKRLSFDLPKGDYQLTCWTVPAEMSDLHADTYIIDAVSV

Nucleotide


Download         Length: 399 bp        

>NTDB_id=1088341 ACLII2_RS20205 WP_003246342.1 3845299..3845697(+) (nin/comJ) [Bacillus subtilis subsp. subtilis strain BM107]
TTGATCAAATCATGGAAGCCGCAAGAACTTTCGATTTCATATCATCAATTTACTGTATTTCAAAAGGATTCTACACCTCC
TGTAATGGATTGGACTGACGAAGCGATTGAAAAAGGATATGCTGCGGCAGACGGAGCCATTTCCTTTGAGGCACAGCGAA
ATACAAAGGCCTTTATTCTTTTTCGCCTGAACAGTTCAGAAACAGTAAACTCCTACGAAAAAAAAGTGACTGTTCCTTTT
CATGTCACAGAAAACGGAATTCATATTGAAAGCATCATGTCTAAAAGACTGTCCTTTGATCTGCCTAAAGGAGACTATCA
ATTGACATGCTGGACTGTGCCGGCTGAAATGTCAGATTTGCACGCCGACACTTATATTATTGATGCTGTTTCTGTGTAA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment