Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   ACLII2_RS20005 Genome accession   NZ_CP178213
Coordinates   3784106..3785056 (-) Length   316 a.a.
NCBI ID   WP_003234491.1    Uniprot ID   A0AAE2SHG3
Organism   Bacillus subtilis subsp. subtilis strain BM107     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3779106..3790056
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLII2_RS19985 cdaE 3779974..3781392 (+) 1419 WP_003246604.1 MDR family MFS transporter -
  ACLII2_RS19990 yclQ 3781439..3782392 (-) 954 WP_003246619.1 petrobactin ABC transporter substrate-binding protein YclQ -
  ACLII2_RS19995 yclP 3782414..3783172 (-) 759 WP_003234487.1 petrobactin ABC transporter ATP-binding protein YclP -
  ACLII2_RS20000 yclO 3783166..3784113 (-) 948 WP_003246705.1 petrobactin ABC transporter permease YclO -
  ACLII2_RS20005 ceuB 3784106..3785056 (-) 951 WP_003234491.1 petrobactin ABC transporter permease YclN Machinery gene
  ACLII2_RS20010 thrD 3785441..3786805 (+) 1365 WP_003234493.1 aspartate kinase -
  ACLII2_RS20015 yczN 3786959..3787072 (+) 114 WP_003234495.1 YjcZ family sporulation protein -
  ACLII2_RS20020 yczM 3787154..3787243 (+) 90 WP_015482794.1 YjcZ family sporulation protein -
  ACLII2_RS20025 phrC 3787343..3787465 (-) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  ACLII2_RS20030 rapC 3787449..3788597 (-) 1149 WP_003246686.1 response regulator aspartate phosphatase RapC Regulator

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34899.33 Da        Isoelectric Point: 9.9364

>NTDB_id=1088337 ACLII2_RS20005 WP_003234491.1 3784106..3785056(-) (ceuB) [Bacillus subtilis subsp. subtilis strain BM107]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTVLLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=1088337 ACLII2_RS20005 WP_003234491.1 3784106..3785056(-) (ceuB) [Bacillus subtilis subsp. subtilis strain BM107]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGTGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGCTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTGTCA
TTGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAATAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCCGCCAGTCCTTTAATCAAAATGCT
GGTCGCGTTTGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTCGGCC
TCAAGTATAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCTCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGTGCTGTTGGGAGCGGTTTTTGTGCTGTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.215

100

0.522

Multiple sequence alignment