Detailed information NTG0108729

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: ABXH20_RS03410
• Genome accession: NZ_AP031328
• Coordinates: 591275..592408 (-)
• Length: 377 a.a.
• NCBI ID: WP_353300695.1
• Uniprot ID: -
• Organism: Thermus thermophilus strain TF24
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 586275..597408

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABXH20_RS03390 (TthTF24_06650)	pilQ	586934..589207 (-)	2274	WP_353300693.1	secretin N-terminal domain-containing protein	Machinery gene
ABXH20_RS03395 (TthTF24_06660)	pilW	589204..590091 (-)	888	WP_353300694.1	competence protein	Machinery gene
ABXH20_RS03400 (TthTF24_06670)	pilO	590088..590669 (-)	582	WP_143586070.1	type 4a pilus biogenesis protein PilO	Machinery gene
ABXH20_RS03405 (TthTF24_06680)	pilN	590659..591282 (-)	624	WP_011173433.1	competence protein	Machinery gene
ABXH20_RS03410 (TthTF24_06690)	pilM	591275..592408 (-)	1134	WP_353300695.1	type IV pilus assembly protein PilM	Machinery gene
ABXH20_RS03415 (TthTF24_06700)	-	592545..593549 (-)	1005	WP_244340638.1	homoisocitrate dehydrogenase	-
ABXH20_RS03420 (TthTF24_06710)	-	593604..594095 (-)	492	WP_011173430.1	DUF5317 domain-containing protein	-
ABXH20_RS03425 (TthTF24_06720)	-	594146..595552 (-)	1407	WP_353300696.1	HD-GYP domain-containing protein	-
ABXH20_RS03440 (TthTF24_06730)	-	596344..597033 (-)	690	WP_353300639.1	IS5-like element ISTth7 family transposase	-

Sequence

Protein

• Length: 377 a.a.
• Molecular weight: 41383.02 Da
• Isoelectric Point: 4.3805

>NTDB_id=108729 ABXH20_RS03410 WP_353300695.1 591275..592408(-) (pilM) [Thermus thermophilus strain TF24]
MFKSLSQLFRPRVEALGLEIGASALKLVEVSGNPPALKALASRPTPPGLLMEGMVAEPAALAQEIKELLLEARTRKRYVV
TALSNLAMILRSIQVPKMPLKEMEEAVRWEAERYIPFPIDEVVLDFAPLTPLSEVQEGEQVQVMVAAARQEAVAGVLEAL
RGAGLVPVVLDVKPFAGLYPLEARLAEEPDRVFLVLDIGAESTSLVLLRGDKPLAVRVLTLSGKDFTEAIARSFNLDLLA
AEEVKRTYGMATLPTEDEELLLDFDAERERYSPGRIYDAIRPVLVELTQELRRSLEFFRIQLEEAPPEVGYLLGGGSKLR
GLASLLTDTLGVNFEPVNPWEAVAVDPKRFEAEQLQEIGPEFAVALGLALRGVEPLD

Nucleotide

• Length: 1134 bp

>NTDB_id=108729 ABXH20_RS03410 WP_353300695.1 591275..592408(-) (pilM) [Thermus thermophilus strain TF24]
GTGTTCAAAAGCCTTAGCCAGCTCTTCCGACCCAGGGTTGAGGCCCTGGGGTTGGAGATCGGGGCCTCCGCCCTGAAGCT
CGTGGAGGTGTCCGGGAACCCCCCTGCCCTCAAGGCCCTGGCCTCCCGCCCCACCCCGCCCGGCCTCCTGATGGAGGGAA
TGGTGGCCGAGCCCGCCGCGCTGGCCCAGGAGATCAAGGAGCTTCTCCTCGAGGCCCGCACCCGCAAGCGCTACGTGGTC
ACCGCCCTCTCCAACCTGGCGATGATCCTCCGCTCCATCCAGGTCCCCAAGATGCCCCTCAAGGAGATGGAGGAAGCGGT
GCGCTGGGAGGCGGAGCGCTACATTCCCTTCCCCATTGACGAGGTGGTCCTGGACTTCGCCCCCCTGACCCCCCTCTCCG
AGGTGCAGGAGGGGGAGCAGGTCCAGGTGATGGTGGCGGCGGCGCGGCAGGAGGCGGTGGCGGGGGTCCTCGAGGCCCTG
AGGGGGGCGGGGCTCGTCCCCGTGGTGCTGGACGTGAAGCCCTTCGCCGGGCTTTACCCTCTGGAGGCCAGGCTTGCGGA
GGAGCCCGACCGGGTCTTCCTCGTCCTGGACATCGGGGCCGAGAGCACGAGCCTCGTCCTGCTCCGGGGGGACAAGCCCC
TGGCGGTGCGCGTCCTCACCCTCTCGGGCAAGGACTTCACCGAGGCCATCGCCCGAAGCTTCAACCTGGACCTCCTCGCC
GCCGAGGAGGTGAAGCGGACCTACGGGATGGCCACCCTCCCCACCGAGGACGAGGAACTCCTCCTGGACTTTGACGCCGA
GCGGGAGCGCTACAGCCCGGGGCGCATCTACGACGCCATCCGCCCGGTGCTGGTGGAGCTCACCCAGGAGCTCCGCCGTA
GCCTGGAGTTCTTCCGCATCCAGCTGGAGGAGGCCCCGCCCGAGGTGGGCTACCTCCTGGGCGGGGGGAGCAAGCTCAGG
GGGCTCGCCTCCCTCCTCACCGACACCCTGGGGGTGAACTTTGAGCCCGTCAACCCCTGGGAGGCGGTGGCGGTGGACCC
CAAGCGCTTTGAGGCGGAGCAACTCCAGGAGATCGGGCCGGAGTTCGCCGTGGCCCTGGGCTTGGCGTTGAGGGGGGTGG
AGCCCCTTGATTAG

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (17-372)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Thermus thermophilus HB27	98.674	100	0.987