Detailed information
Bioinformatically predicted
Overview
| Name | dprA | Type | Machinery gene |
| Locus tag | AB4Y54_RS09350 | Genome accession | NZ_AP031325 |
| Coordinates | 1721053..1722057 (+) | Length | 334 a.a. |
| NCBI ID | WP_353300258.1 | Uniprot ID | - |
| Organism | Thermus thermophilus strain TF21 | ||
| Function | ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing |
||
Genomic Context
Location: 1716053..1727057
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB4Y54_RS09320 (TthTF21_18370) | - | 1716205..1717425 (+) | 1221 | WP_353300255.1 | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | - |
| AB4Y54_RS09325 (TthTF21_18380) | - | 1717435..1717983 (+) | 549 | WP_353300256.1 | Uma2 family endonuclease | - |
| AB4Y54_RS09330 (TthTF21_18390) | - | 1717961..1718935 (-) | 975 | WP_353300257.1 | bifunctional oligoribonuclease/PAP phosphatase NrnA | - |
| AB4Y54_RS09340 (TthTF21_18400) | - | 1719131..1720018 (-) | 888 | WP_143584533.1 | acyltransferase | - |
| AB4Y54_RS09345 (TthTF21_18410) | era | 1720063..1720968 (-) | 906 | WP_008630929.1 | GTPase Era | - |
| AB4Y54_RS09350 (TthTF21_18420) | dprA | 1721053..1722057 (+) | 1005 | WP_353300258.1 | DNA-processing protein DprA | Machinery gene |
| AB4Y54_RS09355 (TthTF21_18430) | - | 1722061..1722969 (-) | 909 | WP_353300259.1 | manganese catalase family protein | - |
| AB4Y54_RS09360 (TthTF21_18440) | - | 1723079..1724032 (+) | 954 | WP_353300260.1 | LysR substrate-binding domain-containing protein | - |
| AB4Y54_RS09365 (TthTF21_18450) | - | 1724019..1724975 (+) | 957 | WP_353300261.1 | branched-chain amino acid transaminase | - |
| AB4Y54_RS09370 (TthTF21_18460) | - | 1724965..1725153 (+) | 189 | WP_038034982.1 | hypothetical protein | - |
| AB4Y54_RS09375 (TthTF21_18470) | - | 1725155..1725394 (+) | 240 | WP_008630920.1 | hypothetical protein | - |
| AB4Y54_RS09380 (TthTF21_18480) | trmH | 1725384..1725968 (-) | 585 | WP_353300262.1 | tRNA (guanosine(18)-2'-O)-methyltransferase TrmH | - |
| AB4Y54_RS09385 (TthTF21_18490) | hisG | 1725965..1726585 (-) | 621 | WP_353300263.1 | ATP phosphoribosyltransferase | - |
Sequence
Protein
Download Length: 334 a.a. Molecular weight: 36024.86 Da Isoelectric Point: 6.8886
>NTDB_id=108715 AB4Y54_RS09350 WP_353300258.1 1721053..1722057(+) (dprA) [Thermus thermophilus strain TF21]
MDPLALALLPGIGPKRLLEALGSGDPLGFLRERFPEAWRHLGEAEARAERERRLAEAMGVRLLGLWEEGFPEGLKALPQP
PTHLYLKGELPPEREAVALVGTRRASPWALAFARRLARELAEAGLWVVSGLARGIDREAHLGALEAGGRTLGVLGSALDR
VYPPENRPLAQRMDLLSEFPFGTGPKPEFFPRRNRLIAGLCRAVVVVEAPLDSGALITARHALELGKEVLAVPGRPTDER
SLGANRLIQDGAYPVLSAEDVLSYLGMSARPKPLPGLSPEEEALYALLQEKKEALPEALAMALGIPPERVLSLLTLLELK
GLARALPGGRYGPG
MDPLALALLPGIGPKRLLEALGSGDPLGFLRERFPEAWRHLGEAEARAERERRLAEAMGVRLLGLWEEGFPEGLKALPQP
PTHLYLKGELPPEREAVALVGTRRASPWALAFARRLARELAEAGLWVVSGLARGIDREAHLGALEAGGRTLGVLGSALDR
VYPPENRPLAQRMDLLSEFPFGTGPKPEFFPRRNRLIAGLCRAVVVVEAPLDSGALITARHALELGKEVLAVPGRPTDER
SLGANRLIQDGAYPVLSAEDVLSYLGMSARPKPLPGLSPEEEALYALLQEKKEALPEALAMALGIPPERVLSLLTLLELK
GLARALPGGRYGPG
Nucleotide
Download Length: 1005 bp
>NTDB_id=108715 AB4Y54_RS09350 WP_353300258.1 1721053..1722057(+) (dprA) [Thermus thermophilus strain TF21]
GTGGACCCCTTGGCCCTCGCCCTCCTCCCGGGCATCGGCCCCAAGCGGCTTTTGGAGGCCTTGGGGTCGGGGGACCCTCT
AGGCTTCCTGCGGGAGCGCTTCCCCGAGGCCTGGCGGCACCTCGGCGAGGCCGAGGCCCGGGCGGAAAGGGAAAGGCGCC
TTGCCGAGGCCATGGGCGTGCGCCTCTTGGGCCTCTGGGAGGAGGGCTTCCCCGAGGGGCTGAAGGCGCTTCCCCAGCCG
CCCACCCACCTCTACCTGAAGGGGGAGCTTCCCCCGGAAAGGGAGGCGGTGGCCCTCGTGGGCACGCGCCGGGCCTCCCC
TTGGGCCCTGGCCTTTGCTAGGAGGCTCGCTCGGGAGCTGGCCGAGGCCGGGCTCTGGGTGGTCTCGGGCCTCGCCCGGG
GCATAGACCGGGAGGCCCACCTCGGGGCCCTCGAGGCCGGGGGGCGCACCCTGGGCGTCCTGGGAAGCGCCCTGGACCGG
GTCTACCCCCCGGAAAACCGCCCTTTGGCCCAACGGATGGACCTCCTCTCCGAGTTCCCCTTCGGCACCGGGCCCAAGCC
CGAGTTCTTTCCCCGGCGGAACCGCCTCATCGCCGGGCTTTGCCGGGCGGTGGTCGTGGTGGAGGCCCCCCTGGACTCCG
GGGCCCTCATCACCGCCCGCCACGCCCTGGAGCTCGGCAAGGAGGTGCTGGCCGTGCCCGGAAGGCCCACGGACGAGCGT
TCTCTGGGAGCCAACCGCCTCATCCAGGACGGGGCCTACCCGGTGCTCTCCGCCGAGGATGTCCTCTCCTATCTGGGAAT
GTCCGCAAGGCCCAAGCCCCTCCCGGGCCTCTCCCCGGAGGAGGAGGCCCTTTACGCCCTCCTGCAGGAAAAGAAGGAGG
CGCTCCCCGAGGCCCTGGCCATGGCCCTGGGGATCCCCCCGGAGCGGGTGCTCTCCCTTCTCACCCTTTTGGAGCTAAAG
GGCCTGGCCCGGGCCCTCCCGGGAGGGCGCTACGGGCCAGGCTAA
GTGGACCCCTTGGCCCTCGCCCTCCTCCCGGGCATCGGCCCCAAGCGGCTTTTGGAGGCCTTGGGGTCGGGGGACCCTCT
AGGCTTCCTGCGGGAGCGCTTCCCCGAGGCCTGGCGGCACCTCGGCGAGGCCGAGGCCCGGGCGGAAAGGGAAAGGCGCC
TTGCCGAGGCCATGGGCGTGCGCCTCTTGGGCCTCTGGGAGGAGGGCTTCCCCGAGGGGCTGAAGGCGCTTCCCCAGCCG
CCCACCCACCTCTACCTGAAGGGGGAGCTTCCCCCGGAAAGGGAGGCGGTGGCCCTCGTGGGCACGCGCCGGGCCTCCCC
TTGGGCCCTGGCCTTTGCTAGGAGGCTCGCTCGGGAGCTGGCCGAGGCCGGGCTCTGGGTGGTCTCGGGCCTCGCCCGGG
GCATAGACCGGGAGGCCCACCTCGGGGCCCTCGAGGCCGGGGGGCGCACCCTGGGCGTCCTGGGAAGCGCCCTGGACCGG
GTCTACCCCCCGGAAAACCGCCCTTTGGCCCAACGGATGGACCTCCTCTCCGAGTTCCCCTTCGGCACCGGGCCCAAGCC
CGAGTTCTTTCCCCGGCGGAACCGCCTCATCGCCGGGCTTTGCCGGGCGGTGGTCGTGGTGGAGGCCCCCCTGGACTCCG
GGGCCCTCATCACCGCCCGCCACGCCCTGGAGCTCGGCAAGGAGGTGCTGGCCGTGCCCGGAAGGCCCACGGACGAGCGT
TCTCTGGGAGCCAACCGCCTCATCCAGGACGGGGCCTACCCGGTGCTCTCCGCCGAGGATGTCCTCTCCTATCTGGGAAT
GTCCGCAAGGCCCAAGCCCCTCCCGGGCCTCTCCCCGGAGGAGGAGGCCCTTTACGCCCTCCTGCAGGAAAAGAAGGAGG
CGCTCCCCGAGGCCCTGGCCATGGCCCTGGGGATCCCCCCGGAGCGGGTGCTCTCCCTTCTCACCCTTTTGGAGCTAAAG
GGCCTGGCCCGGGCCCTCCCGGGAGGGCGCTACGGGCCAGGCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprA | Thermus thermophilus HB27 |
96.707 |
100 |
0.967 |
| dprA | Vibrio campbellii strain DS40M4 |
38.827 |
100 |
0.416 |
| dprA | Vibrio cholerae strain A1552 |
37.535 |
100 |
0.401 |
| dprA | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
46.341 |
85.928 |
0.398 |