Detailed information NTG0108698

Bioinformatically predicted

Overview

• Name: pilQ
• Type: Machinery gene
• Locus tag: AB4Y54_RS03395
• Genome accession: NZ_AP031325
• Coordinates: 586947..589220 (-)
• Length: 757 a.a.
• NCBI ID: WP_353300693.1
• Uniprot ID: -
• Organism: Thermus thermophilus strain TF21
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 581947..594220

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB4Y54_RS03365 (TthTF21_06590)	-	581973..582320 (+)	348	WP_353300688.1	DUF4870 domain-containing protein	-
AB4Y54_RS03370 (TthTF21_06600)	-	582298..582675 (-)	378	WP_353300689.1	4'-phosphopantetheinyl transferase superfamily protein	-
AB4Y54_RS03375 (TthTF21_06610)	rsmF	582718..584088 (+)	1371	WP_353300690.1	16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF	-
AB4Y54_RS03380 (TthTF21_06620)	-	584134..585180 (-)	1047	WP_353300691.1	3-dehydroquinate synthase family protein	-
AB4Y54_RS03385 (TthTF21_06630)	-	585158..585712 (-)	555	WP_353300922.1	shikimate kinase	-
AB4Y54_RS03390 (TthTF21_06640)	aroC	585737..586888 (-)	1152	WP_353300692.1	chorismate synthase	-
AB4Y54_RS03395 (TthTF21_06650)	pilQ	586947..589220 (-)	2274	WP_353300693.1	secretin N-terminal domain-containing protein	Machinery gene
AB4Y54_RS03400 (TthTF21_06660)	pilW	589217..589801 (-)	585	WP_353406126.1	hypothetical protein	Machinery gene
AB4Y54_RS03405 (TthTF21_06670)	pilO	590100..590681 (-)	582	WP_143586070.1	type 4a pilus biogenesis protein PilO	Machinery gene
AB4Y54_RS03410 (TthTF21_06680)	pilN	590671..591294 (-)	624	WP_011173433.1	competence protein	Machinery gene
AB4Y54_RS03415 (TthTF21_06690)	pilM	591287..592420 (-)	1134	WP_353300695.1	type IV pilus assembly protein PilM	Machinery gene
AB4Y54_RS03420 (TthTF21_06700)	-	592557..593561 (-)	1005	WP_244340638.1	homoisocitrate dehydrogenase	-
AB4Y54_RS03425 (TthTF21_06710)	-	593616..594107 (-)	492	WP_011173430.1	DUF5317 domain-containing protein	-

Sequence

Protein

• Length: 757 a.a.
• Molecular weight: 82703.77 Da
• Isoelectric Point: 5.3086

>NTDB_id=108698 AB4Y54_RS03395 WP_353300693.1 586947..589220(-) (pilQ) [Thermus thermophilus strain TF21]
MKSAWIRAAVIALAGLGAFGLAGSFPEEPRFQAPVNLKVSESQVKAGQTLPLDVVLEALARSVGLQPLIYRAYDPSGDPA
KAQPPLPNIKLDFQGKPFREVWDLLFATYGNQYSLDYLFLPPDVVVVAPTQVITALVDAPSRTGAMERRPYIVGVPEIAY
KRTETDAQGQPRTVVNIEGAKAWVQNDLLPFLSREAAGLNVNWIVVEEGGRLKAVLSVLATPEQHARFSDILQRAGIDFR
PLPALAQPKPRVEKTYTLTYATFPDLLVFLQSRLPEAQISVVPTNPQRAIVLATEEDHARLSELLKTADVPKTVRRVYAL
QNLTFREAQERLKPLLEKDLKGARLESLPGNPKALLLEAPEAEHALFAEILKALDVPPQAPQAPQEATLRRLYPLRYANA
EQVAPFLAREVPGIVVQTVPGQPVLSVRGTEKQLAEVESLLAQIDRAPEQGPPVFQRAYQLSNAKAVELAQVLQEALKAR
QAQNQGQQNQAPPTREATVVADPRTNTLIVTGTQEDLALVEGLIPKLDQPVPQVSLRVRIQEVQSNLTRSLGLKWNSIAG
GNAAASILDSGLSLIFDSTRSLAALNIMATLDALQQQGLSRALRDVNQTVLNNQTARLQSGETFFIRRVVNDQVERVPFD
VGLIVEVTPQITADGQILLNIKAEVSGNVQRNPVDGDVDRFTKQVVTTTLRVKDGETVVLGGLTSQESNQSQQGVPLLMD
IPLIGELFKQRTNESTDKELLVVITADILKETASANP

Nucleotide

• Length: 2274 bp

>NTDB_id=108698 AB4Y54_RS03395 WP_353300693.1 586947..589220(-) (pilQ) [Thermus thermophilus strain TF21]
ATGAAGAGTGCGTGGATCCGTGCGGCCGTGATCGCCCTCGCAGGGCTAGGGGCTTTTGGCCTTGCGGGGAGCTTTCCCGA
GGAGCCCCGCTTCCAGGCCCCGGTGAACCTCAAGGTCTCGGAATCCCAGGTCAAGGCGGGCCAGACCCTGCCCTTGGACG
TGGTCCTCGAGGCCCTGGCAAGGAGCGTGGGGCTCCAGCCCCTCATCTACCGGGCCTACGACCCGAGCGGGGACCCCGCC
AAGGCCCAGCCCCCCCTGCCCAACATCAAGCTGGACTTCCAGGGCAAGCCCTTCCGGGAGGTCTGGGACCTCCTCTTCGC
CACCTACGGCAACCAGTACAGCCTGGACTACCTCTTCCTGCCCCCCGACGTGGTGGTGGTGGCCCCCACCCAGGTGATCA
CCGCCTTGGTGGACGCCCCGAGCCGCACGGGGGCCATGGAGCGCAGGCCCTACATCGTGGGCGTCCCCGAGATCGCCTAT
AAGCGCACGGAGACGGACGCCCAGGGCCAGCCCCGCACGGTCGTCAACATTGAGGGCGCCAAGGCCTGGGTCCAGAACGA
CCTCCTCCCCTTCCTCTCCCGGGAGGCCGCGGGGCTCAACGTGAACTGGATCGTGGTGGAGGAGGGCGGGAGGCTCAAGG
CCGTTCTCTCCGTTCTCGCCACCCCCGAGCAACACGCCCGCTTCTCCGATATCCTGCAACGGGCCGGGATTGACTTCCGC
CCCCTCCCCGCCCTGGCCCAGCCCAAGCCCCGGGTGGAGAAGACCTACACCCTCACCTACGCCACCTTCCCCGACCTCCT
CGTCTTCCTCCAGTCCCGCCTCCCCGAGGCCCAGATCAGCGTGGTTCCCACCAACCCCCAAAGGGCCATCGTCCTCGCCA
CCGAGGAGGACCACGCCCGCTTGAGCGAGCTTCTGAAGACGGCCGACGTCCCCAAGACCGTCCGCCGGGTCTACGCCCTG
CAGAACCTCACCTTCAGGGAGGCCCAGGAGCGCCTAAAGCCCCTCCTGGAGAAGGACCTCAAGGGGGCCCGCCTGGAGAG
CCTCCCCGGCAACCCCAAGGCCCTCCTCCTCGAGGCCCCCGAGGCGGAGCACGCCCTCTTCGCCGAGATCCTGAAGGCCC
TGGACGTCCCCCCCCAGGCCCCCCAAGCCCCCCAGGAGGCCACCTTGCGGCGCCTCTACCCCCTGCGCTACGCCAACGCC
GAGCAGGTGGCCCCCTTCCTCGCCCGGGAGGTGCCGGGGATCGTGGTCCAGACCGTTCCCGGCCAGCCCGTCCTCTCGGT
GCGGGGCACGGAGAAGCAGCTCGCCGAGGTGGAAAGCCTCCTCGCCCAGATTGACCGGGCCCCCGAGCAAGGCCCTCCCG
TGTTCCAGCGGGCCTACCAGCTCTCCAACGCCAAGGCGGTGGAGCTCGCCCAGGTGCTCCAGGAGGCGCTCAAAGCCCGG
CAGGCCCAGAACCAGGGCCAGCAGAACCAGGCCCCCCCCACCCGGGAGGCCACGGTGGTGGCCGACCCCAGGACCAACAC
CCTCATCGTCACCGGCACCCAGGAGGACCTCGCCCTGGTGGAGGGCCTCATCCCCAAGCTGGACCAGCCTGTGCCCCAGG
TTTCCTTGCGGGTGCGCATCCAGGAGGTCCAGTCCAACCTGACCCGTAGTCTCGGCCTCAAGTGGAACAGCATCGCCGGC
GGCAATGCGGCGGCCAGCATCCTGGACTCGGGGCTTTCCCTCATCTTTGACTCCACGCGAAGCCTCGCCGCCCTCAACAT
CATGGCCACCCTGGACGCCCTGCAGCAACAGGGCCTCTCCCGGGCCCTCCGGGACGTGAACCAGACCGTCCTCAACAACC
AGACCGCCCGCCTGCAGTCCGGCGAGACCTTCTTCATCCGGCGGGTGGTGAACGACCAGGTGGAACGGGTCCCCTTTGAC
GTGGGGCTCATCGTGGAGGTCACGCCCCAGATCACCGCCGACGGCCAGATCCTCCTCAACATCAAGGCCGAGGTCTCGGG
GAACGTCCAGCGCAACCCCGTGGACGGGGACGTGGACCGCTTCACCAAGCAGGTGGTGACCACCACCCTCAGGGTCAAGG
ACGGGGAGACCGTGGTCCTCGGGGGCCTCACCTCCCAGGAGTCCAACCAGAGCCAGCAGGGGGTGCCCCTCCTCATGGAC
ATCCCCCTGATCGGCGAGCTCTTCAAGCAGCGGACGAACGAGAGCACCGACAAGGAGCTTTTGGTGGTGATCACCGCCGA
CATCCTCAAGGAGACGGCCTCGGCGAACCCCTAA

Domains

Predicted by InterproScan.

• Bacterial type II and III secretion system protein (Secretin) (593-750)

• Bacterial type II/III secretion system short domain (Secretin_N) (391-450)

• Bacterial type II/III secretion system short domain (Secretin_N) (457-533)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilQ	Thermus thermophilus HB27	98.018	100	0.98