Detailed information    

insolico Bioinformatically predicted

Overview


Name   pilG   Type   Regulator
Locus tag   VT188_RS02065 Genome accession   NZ_CP177358
Coordinates   443066..443473 (+) Length   135 a.a.
NCBI ID   WP_003084583.1    Uniprot ID   A0A0H2ZL28
Organism   Pseudomonas aeruginosa strain CWC0815     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 438066..448473
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VT188_RS02035 (VT188_002035) - 438114..439118 (-) 1005 WP_017148568.1 aspartate carbamoyltransferase catalytic subunit -
  VT188_RS02040 (VT188_002040) pyrR 439142..439654 (-) 513 WP_003084574.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  VT188_RS02045 (VT188_002045) ruvX 439766..440200 (-) 435 WP_003084575.1 Holliday junction resolvase RuvX -
  VT188_RS02050 (VT188_002050) - 440200..440769 (-) 570 WP_003100947.1 YqgE/AlgH family protein -
  VT188_RS02055 (VT188_002055) - 440818..441711 (-) 894 WP_003084580.1 TonB family protein -
  VT188_RS02060 (VT188_002060) gshB 441858..442811 (-) 954 WP_003100943.1 glutathione synthase -
  VT188_RS02065 (VT188_002065) pilG 443066..443473 (+) 408 WP_003084583.1 twitching motility response regulator PilG Regulator
  VT188_RS02070 (VT188_002070) pilH 443520..443885 (+) 366 WP_003084587.1 twitching motility response regulator PilH -
  VT188_RS02075 (VT188_002075) - 443936..444472 (+) 537 WP_003084590.1 chemotaxis protein CheW -
  VT188_RS02080 (VT188_002080) pilJ 444557..446605 (+) 2049 WP_003100940.1 chemotaxis chemoreceptor PilJ -
  VT188_RS02085 (VT188_002085) pilK 446666..447541 (+) 876 WP_003100938.1 type 4 fimbrial methyltransferase PilK -

Sequence


Protein


Download         Length: 135 a.a.        Molecular weight: 14718.11 Da        Isoelectric Point: 7.1340

>NTDB_id=1086845 VT188_RS02065 WP_003084583.1 443066..443473(+) (pilG) [Pseudomonas aeruginosa strain CWC0815]
MEQQSDGLKVMVIDDSKTIRRTAETLLKKVGCDVITAIDGFDALAKIADTHPNIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPSFTPVDAVS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=1086845 VT188_RS02065 WP_003084583.1 443066..443473(+) (pilG) [Pseudomonas aeruginosa strain CWC0815]
ATGGAACAGCAATCCGACGGTTTGAAAGTGATGGTGATCGACGATTCGAAAACGATTCGTCGCACCGCCGAAACACTGCT
GAAAAAGGTCGGTTGCGACGTGATCACGGCAATCGACGGCTTCGATGCCCTGGCGAAGATCGCCGATACCCATCCGAACA
TCATTTTCGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCCCTGATCAAGAACAACAGCGCGTTCAAG
TCCACCCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGCTCCGACCAGTA
CCTCACCAAGCCGTTCAGCAAGGAAGAGCTGCTGGGCGCGATCAAGGCACACGTACCCAGCTTCACCCCGGTGGACGCCG
TTTCCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0H2ZL28

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.803

94.074

0.704

  vicR Streptococcus mutans UA159

44.444

86.667

0.385


Multiple sequence alignment