Detailed information
Bioinformatically predicted
Overview
| Name | pilW | Type | Machinery gene |
| Locus tag | ABWW34_RS03395 | Genome accession | NZ_AP031323 |
| Coordinates | 587830..588414 (-) | Length | 194 a.a. |
| NCBI ID | WP_353406126.1 | Uniprot ID | - |
| Organism | Thermus thermophilus strain TF19 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 582830..593414
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABWW34_RS03380 (TthTF19_06600) | - | 583771..584325 (-) | 555 | WP_353300922.1 | shikimate kinase | - |
| ABWW34_RS03385 (TthTF19_06610) | aroC | 584350..585501 (-) | 1152 | WP_353300692.1 | chorismate synthase | - |
| ABWW34_RS03390 (TthTF19_06620) | pilQ | 585560..587833 (-) | 2274 | WP_353300693.1 | secretin N-terminal domain-containing protein | Machinery gene |
| ABWW34_RS03395 (TthTF19_06630) | pilW | 587830..588414 (-) | 585 | WP_353406126.1 | hypothetical protein | Machinery gene |
| ABWW34_RS03400 (TthTF19_06640) | pilO | 588713..589294 (-) | 582 | WP_143586070.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| ABWW34_RS03405 (TthTF19_06650) | pilN | 589284..589907 (-) | 624 | WP_011173433.1 | competence protein | Machinery gene |
| ABWW34_RS03410 (TthTF19_06660) | pilM | 589900..591033 (-) | 1134 | WP_353300695.1 | type IV pilus assembly protein PilM | Machinery gene |
| ABWW34_RS03415 (TthTF19_06670) | - | 591170..592174 (-) | 1005 | WP_244340638.1 | homoisocitrate dehydrogenase | - |
| ABWW34_RS03420 (TthTF19_06680) | - | 592229..592720 (-) | 492 | WP_011173430.1 | DUF5317 domain-containing protein | - |
Sequence
Protein
Download Length: 194 a.a. Molecular weight: 19498.48 Da Isoelectric Point: 4.6552
>NTDB_id=108672 ABWW34_RS03395 WP_353406126.1 587830..588414(-) (pilW) [Thermus thermophilus strain TF19]
MARAEPPPPNPFVPLVVETPPPPPPPASASRPTPVPEGPAVRVQTPAPAPQAAPATRPIPGTSGALPAPKVLSPALSAPL
PQARETPPRVAVPTALVEAPLPGPEEKGAEAEAPTPASPLERLVAEKGLRLSGTLLGPVSVAILESKEGYLVVPAGSPIP
GTEAVVRQVEEGSVTLALKEETLNLSLVQAGGGQ
MARAEPPPPNPFVPLVVETPPPPPPPASASRPTPVPEGPAVRVQTPAPAPQAAPATRPIPGTSGALPAPKVLSPALSAPL
PQARETPPRVAVPTALVEAPLPGPEEKGAEAEAPTPASPLERLVAEKGLRLSGTLLGPVSVAILESKEGYLVVPAGSPIP
GTEAVVRQVEEGSVTLALKEETLNLSLVQAGGGQ
Nucleotide
Download Length: 585 bp
>NTDB_id=108672 ABWW34_RS03395 WP_353406126.1 587830..588414(-) (pilW) [Thermus thermophilus strain TF19]
GTGGCCCGGGCCGAGCCCCCGCCCCCGAACCCCTTCGTCCCCCTGGTGGTGGAAACCCCACCCCCACCCCCACCTCCGGC
CTCCGCCTCCCGCCCCACGCCCGTCCCCGAGGGGCCCGCCGTCCGGGTCCAGACCCCTGCCCCGGCCCCCCAGGCGGCCC
CCGCCACCCGGCCCATCCCCGGGACCTCCGGCGCCCTCCCGGCGCCCAAGGTCCTCTCCCCCGCGCTGTCCGCCCCCCTG
CCCCAGGCCAGGGAAACGCCGCCTAGGGTCGCCGTGCCCACGGCGCTCGTGGAGGCCCCCCTCCCCGGGCCCGAGGAAAA
AGGGGCGGAGGCGGAGGCCCCCACCCCGGCCTCGCCGCTGGAGCGCCTGGTGGCGGAAAAGGGCCTCCGCCTCTCGGGGA
CCCTGCTCGGCCCCGTGAGCGTGGCCATCCTGGAGAGCAAGGAGGGCTACCTCGTCGTCCCGGCGGGAAGCCCCATCCCC
GGCACGGAGGCCGTGGTGCGCCAGGTGGAGGAAGGAAGCGTGACCCTGGCCTTGAAGGAGGAAACCTTGAACCTGTCCCT
CGTCCAAGCTGGAGGTGGCCAATGA
GTGGCCCGGGCCGAGCCCCCGCCCCCGAACCCCTTCGTCCCCCTGGTGGTGGAAACCCCACCCCCACCCCCACCTCCGGC
CTCCGCCTCCCGCCCCACGCCCGTCCCCGAGGGGCCCGCCGTCCGGGTCCAGACCCCTGCCCCGGCCCCCCAGGCGGCCC
CCGCCACCCGGCCCATCCCCGGGACCTCCGGCGCCCTCCCGGCGCCCAAGGTCCTCTCCCCCGCGCTGTCCGCCCCCCTG
CCCCAGGCCAGGGAAACGCCGCCTAGGGTCGCCGTGCCCACGGCGCTCGTGGAGGCCCCCCTCCCCGGGCCCGAGGAAAA
AGGGGCGGAGGCGGAGGCCCCCACCCCGGCCTCGCCGCTGGAGCGCCTGGTGGCGGAAAAGGGCCTCCGCCTCTCGGGGA
CCCTGCTCGGCCCCGTGAGCGTGGCCATCCTGGAGAGCAAGGAGGGCTACCTCGTCGTCCCGGCGGGAAGCCCCATCCCC
GGCACGGAGGCCGTGGTGCGCCAGGTGGAGGAAGGAAGCGTGACCCTGGCCTTGAAGGAGGAAACCTTGAACCTGTCCCT
CGTCCAAGCTGGAGGTGGCCAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilW | Thermus thermophilus HB27 |
96.392 |
100 |
0.964 |