Detailed information NTG0108671

Bioinformatically predicted

Overview

• Name: pilQ
• Type: Machinery gene
• Locus tag: ABWW34_RS03390
• Genome accession: NZ_AP031323
• Coordinates: 585560..587833 (-)
• Length: 757 a.a.
• NCBI ID: WP_353300693.1
• Uniprot ID: -
• Organism: Thermus thermophilus strain TF19
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 580560..592833

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABWW34_RS03360 (TthTF19_06560)	-	580586..580933 (+)	348	WP_353300688.1	DUF4870 domain-containing protein	-
ABWW34_RS03365 (TthTF19_06570)	-	580911..581288 (-)	378	WP_353300689.1	4'-phosphopantetheinyl transferase superfamily protein	-
ABWW34_RS03370 (TthTF19_06580)	rsmF	581331..582701 (+)	1371	WP_353300690.1	16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF	-
ABWW34_RS03375 (TthTF19_06590)	-	582747..583793 (-)	1047	WP_353300691.1	3-dehydroquinate synthase family protein	-
ABWW34_RS03380 (TthTF19_06600)	-	583771..584325 (-)	555	WP_353300922.1	shikimate kinase	-
ABWW34_RS03385 (TthTF19_06610)	aroC	584350..585501 (-)	1152	WP_353300692.1	chorismate synthase	-
ABWW34_RS03390 (TthTF19_06620)	pilQ	585560..587833 (-)	2274	WP_353300693.1	secretin N-terminal domain-containing protein	Machinery gene
ABWW34_RS03395 (TthTF19_06630)	pilW	587830..588414 (-)	585	WP_353406126.1	hypothetical protein	Machinery gene
ABWW34_RS03400 (TthTF19_06640)	pilO	588713..589294 (-)	582	WP_143586070.1	type 4a pilus biogenesis protein PilO	Machinery gene
ABWW34_RS03405 (TthTF19_06650)	pilN	589284..589907 (-)	624	WP_011173433.1	competence protein	Machinery gene
ABWW34_RS03410 (TthTF19_06660)	pilM	589900..591033 (-)	1134	WP_353300695.1	type IV pilus assembly protein PilM	Machinery gene
ABWW34_RS03415 (TthTF19_06670)	-	591170..592174 (-)	1005	WP_244340638.1	homoisocitrate dehydrogenase	-
ABWW34_RS03420 (TthTF19_06680)	-	592229..592720 (-)	492	WP_011173430.1	DUF5317 domain-containing protein	-

Sequence

Protein

• Length: 757 a.a.
• Molecular weight: 82703.77 Da
• Isoelectric Point: 5.3086

>NTDB_id=108671 ABWW34_RS03390 WP_353300693.1 585560..587833(-) (pilQ) [Thermus thermophilus strain TF19]
MKSAWIRAAVIALAGLGAFGLAGSFPEEPRFQAPVNLKVSESQVKAGQTLPLDVVLEALARSVGLQPLIYRAYDPSGDPA
KAQPPLPNIKLDFQGKPFREVWDLLFATYGNQYSLDYLFLPPDVVVVAPTQVITALVDAPSRTGAMERRPYIVGVPEIAY
KRTETDAQGQPRTVVNIEGAKAWVQNDLLPFLSREAAGLNVNWIVVEEGGRLKAVLSVLATPEQHARFSDILQRAGIDFR
PLPALAQPKPRVEKTYTLTYATFPDLLVFLQSRLPEAQISVVPTNPQRAIVLATEEDHARLSELLKTADVPKTVRRVYAL
QNLTFREAQERLKPLLEKDLKGARLESLPGNPKALLLEAPEAEHALFAEILKALDVPPQAPQAPQEATLRRLYPLRYANA
EQVAPFLAREVPGIVVQTVPGQPVLSVRGTEKQLAEVESLLAQIDRAPEQGPPVFQRAYQLSNAKAVELAQVLQEALKAR
QAQNQGQQNQAPPTREATVVADPRTNTLIVTGTQEDLALVEGLIPKLDQPVPQVSLRVRIQEVQSNLTRSLGLKWNSIAG
GNAAASILDSGLSLIFDSTRSLAALNIMATLDALQQQGLSRALRDVNQTVLNNQTARLQSGETFFIRRVVNDQVERVPFD
VGLIVEVTPQITADGQILLNIKAEVSGNVQRNPVDGDVDRFTKQVVTTTLRVKDGETVVLGGLTSQESNQSQQGVPLLMD
IPLIGELFKQRTNESTDKELLVVITADILKETASANP

Nucleotide

• Length: 2274 bp

>NTDB_id=108671 ABWW34_RS03390 WP_353300693.1 585560..587833(-) (pilQ) [Thermus thermophilus strain TF19]
ATGAAGAGTGCGTGGATCCGTGCGGCCGTGATCGCCCTCGCAGGGCTAGGGGCTTTTGGCCTTGCGGGGAGCTTTCCCGA
GGAGCCCCGCTTCCAGGCCCCGGTGAACCTCAAGGTCTCGGAATCCCAGGTCAAGGCGGGCCAGACCCTGCCCTTGGACG
TGGTCCTCGAGGCCCTGGCAAGGAGCGTGGGGCTCCAGCCCCTCATCTACCGGGCCTACGACCCGAGCGGGGACCCCGCC
AAGGCCCAGCCCCCCCTGCCCAACATCAAGCTGGACTTCCAGGGCAAGCCCTTCCGGGAGGTCTGGGACCTCCTCTTCGC
CACCTACGGCAACCAGTACAGCCTGGACTACCTCTTCCTGCCCCCCGACGTGGTGGTGGTGGCCCCCACCCAGGTGATCA
CCGCCTTGGTGGACGCCCCGAGCCGCACGGGGGCCATGGAGCGCAGGCCCTACATCGTGGGCGTCCCCGAGATCGCCTAT
AAGCGCACGGAGACGGACGCCCAGGGCCAGCCCCGCACGGTCGTCAACATTGAGGGCGCCAAGGCCTGGGTCCAGAACGA
CCTCCTCCCCTTCCTCTCCCGGGAGGCCGCGGGGCTCAACGTGAACTGGATCGTGGTGGAGGAGGGCGGGAGGCTCAAGG
CCGTTCTCTCCGTTCTCGCCACCCCCGAGCAACACGCCCGCTTCTCCGATATCCTGCAACGGGCCGGGATTGACTTCCGC
CCCCTCCCCGCCCTGGCCCAGCCCAAGCCCCGGGTGGAGAAGACCTACACCCTCACCTACGCCACCTTCCCCGACCTCCT
CGTCTTCCTCCAGTCCCGCCTCCCCGAGGCCCAGATCAGCGTGGTTCCCACCAACCCCCAAAGGGCCATCGTCCTCGCCA
CCGAGGAGGACCACGCCCGCTTGAGCGAGCTTCTGAAGACGGCCGACGTCCCCAAGACCGTCCGCCGGGTCTACGCCCTG
CAGAACCTCACCTTCAGGGAGGCCCAGGAGCGCCTAAAGCCCCTCCTGGAGAAGGACCTCAAGGGGGCCCGCCTGGAGAG
CCTCCCCGGCAACCCCAAGGCCCTCCTCCTCGAGGCCCCCGAGGCGGAGCACGCCCTCTTCGCCGAGATCCTGAAGGCCC
TGGACGTCCCCCCCCAGGCCCCCCAAGCCCCCCAGGAGGCCACCTTGCGGCGCCTCTACCCCCTGCGCTACGCCAACGCC
GAGCAGGTGGCCCCCTTCCTCGCCCGGGAGGTGCCGGGGATCGTGGTCCAGACCGTTCCCGGCCAGCCCGTCCTCTCGGT
GCGGGGCACGGAGAAGCAGCTCGCCGAGGTGGAAAGCCTCCTCGCCCAGATTGACCGGGCCCCCGAGCAAGGCCCTCCCG
TGTTCCAGCGGGCCTACCAGCTCTCCAACGCCAAGGCGGTGGAGCTCGCCCAGGTGCTCCAGGAGGCGCTCAAAGCCCGG
CAGGCCCAGAACCAGGGCCAGCAGAACCAGGCCCCCCCCACCCGGGAGGCCACGGTGGTGGCCGACCCCAGGACCAACAC
CCTCATCGTCACCGGCACCCAGGAGGACCTCGCCCTGGTGGAGGGCCTCATCCCCAAGCTGGACCAGCCTGTGCCCCAGG
TTTCCTTGCGGGTGCGCATCCAGGAGGTCCAGTCCAACCTGACCCGTAGTCTCGGCCTCAAGTGGAACAGCATCGCCGGC
GGCAATGCGGCGGCCAGCATCCTGGACTCGGGGCTTTCCCTCATCTTTGACTCCACGCGAAGCCTCGCCGCCCTCAACAT
CATGGCCACCCTGGACGCCCTGCAGCAACAGGGCCTCTCCCGGGCCCTCCGGGACGTGAACCAGACCGTCCTCAACAACC
AGACCGCCCGCCTGCAGTCCGGCGAGACCTTCTTCATCCGGCGGGTGGTGAACGACCAGGTGGAACGGGTCCCCTTTGAC
GTGGGGCTCATCGTGGAGGTCACGCCCCAGATCACCGCCGACGGCCAGATCCTCCTCAACATCAAGGCCGAGGTCTCGGG
GAACGTCCAGCGCAACCCCGTGGACGGGGACGTGGACCGCTTCACCAAGCAGGTGGTGACCACCACCCTCAGGGTCAAGG
ACGGGGAGACCGTGGTCCTCGGGGGCCTCACCTCCCAGGAGTCCAACCAGAGCCAGCAGGGGGTGCCCCTCCTCATGGAC
ATCCCCCTGATCGGCGAGCTCTTCAAGCAGCGGACGAACGAGAGCACCGACAAGGAGCTTTTGGTGGTGATCACCGCCGA
CATCCTCAAGGAGACGGCCTCGGCGAACCCCTAA

Domains

Predicted by InterproScan.

• Bacterial type II and III secretion system protein (Secretin) (593-750)

• Bacterial type II/III secretion system short domain (Secretin_N) (391-450)

• Bacterial type II/III secretion system short domain (Secretin_N) (457-533)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilQ	Thermus thermophilus HB27	98.018	100	0.98