Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   ACLF6N_RS19990 Genome accession   NZ_CP177279
Coordinates   3721167..3721286 (+) Length   39 a.a.
NCBI ID   WP_009968329.1    Uniprot ID   A0A199WEM2
Organism   Bacillus subtilis strain KFRI-P74     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 3716167..3726286
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLF6N_RS19965 (ACLF6N_19965) albG 3716331..3717032 (+) 702 WP_015250988.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -
  ACLF6N_RS19970 (ACLF6N_19970) ywhL 3717038..3718414 (-) 1377 WP_412052480.1 YncE family protein -
  ACLF6N_RS19975 (ACLF6N_19975) ywhK 3718453..3719808 (-) 1356 WP_242304441.1 YncE family protein -
  ACLF6N_RS19980 (ACLF6N_19980) - 3719805..3720035 (-) 231 WP_043858872.1 hypothetical protein -
  ACLF6N_RS19985 (ACLF6N_19985) rapF 3720038..3721183 (+) 1146 WP_021480843.1 response regulator aspartate phosphatase RapF Regulator
  ACLF6N_RS19990 (ACLF6N_19990) phrF 3721167..3721286 (+) 120 WP_009968329.1 phosphatase RapF inhibitor PhrF Regulator
  ACLF6N_RS19995 (ACLF6N_19995) - 3721384..3721811 (+) 428 Protein_3881 YbaK/EbsC family protein -
  ACLF6N_RS20000 (ACLF6N_20000) speB 3721876..3722748 (-) 873 WP_003227545.1 agmatinase -
  ACLF6N_RS20005 (ACLF6N_20005) speE 3722809..3723639 (-) 831 WP_003227543.1 spermidine synthase -
  ACLF6N_RS20010 (ACLF6N_20010) pbpG 3723841..3725916 (+) 2076 WP_412052481.1 transglycosylase domain-containing protein -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4199.10 Da        Isoelectric Point: 10.4997

>NTDB_id=1086581 ACLF6N_RS19990 WP_009968329.1 3721167..3721286(+) (phrF) [Bacillus subtilis strain KFRI-P74]
MKLKSKLLLSCLALSTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=1086581 ACLF6N_RS19990 WP_009968329.1 3721167..3721286(+) (phrF) [Bacillus subtilis strain KFRI-P74]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTAAGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A199WEM2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

100

100

1
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487

Multiple sequence alignment