Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   ACJWMD_RS05375 Genome accession   NZ_CP177182
Coordinates   1165203..1166015 (-) Length   270 a.a.
NCBI ID   WP_004182610.1    Uniprot ID   A0AAW7PMH8
Organism   Streptococcus salivarius strain MRD6060     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1160203..1171015
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACJWMD_RS05345 - 1160401..1161165 (-) 765 Protein_1002 nucleoside phosphorylase -
  ACJWMD_RS05350 - 1161170..1162036 (-) 867 WP_004182606.1 GNAT family N-acetyltransferase -
  ACJWMD_RS05355 yidA 1162215..1163021 (+) 807 WP_004182607.1 sugar-phosphatase -
  ACJWMD_RS05360 - 1163021..1164235 (+) 1215 WP_004182608.1 aminoacyltransferase -
  ACJWMD_RS05365 - 1164337..1164613 (-) 277 Protein_1006 ISL3 family transposase -
  ACJWMD_RS05370 - 1164785..1165144 (-) 360 WP_004182609.1 YbaN family protein -
  ACJWMD_RS05375 vicX 1165203..1166015 (-) 813 WP_004182610.1 MBL fold metallo-hydrolase Regulator
  ACJWMD_RS05380 vicK 1166021..1167361 (-) 1341 WP_002885062.1 cell wall metabolism sensor histidine kinase VicK Regulator
  ACJWMD_RS05385 vicR 1167354..1168061 (-) 708 WP_002884978.1 response regulator YycF Regulator
  ACJWMD_RS05390 - 1168346..1169113 (+) 768 WP_002885036.1 amino acid ABC transporter ATP-binding protein -
  ACJWMD_RS05395 - 1169123..1169956 (+) 834 WP_004182611.1 transporter substrate-binding domain-containing protein -
  ACJWMD_RS05400 - 1169974..1170672 (+) 699 WP_002886251.1 amino acid ABC transporter permease -

Sequence

Protein


Download         Length: 270 a.a.        Molecular weight: 30094.89 Da        Isoelectric Point: 5.1733

>NTDB_id=1086013 ACJWMD_RS05375 WP_004182610.1 1165203..1166015(-) (vicX) [Streptococcus salivarius strain MRD6060]
MTSDLGFKYSILASGSTGNSFYLETPEKKILVDAGLSGKKITSLLAEIDRDPSDLDAILVTHEHKDHIHGVGVLARKYGM
DIYANENTWQIMDSKNMLGKIDNSQKHVFSRDKLLTFGDLDIESFGVSHDAIDPQFYRFMKDGKSFVMLTDTGYVSDRMA
GIIENADGYLIESNHDVEILRAGSYPWSTKQRILSDQGHLCNEDGADAMIRTIGNKTKKIYLGHLSKENNIKELAHMTME
NQLARADFGVGTDFKVYDTSPDTATPLTDI

Nucleotide


Download         Length: 813 bp        

>NTDB_id=1086013 ACJWMD_RS05375 WP_004182610.1 1165203..1166015(-) (vicX) [Streptococcus salivarius strain MRD6060]
ATGACCTCAGATTTAGGGTTTAAATATAGTATTTTGGCTTCAGGGTCAACTGGTAATTCCTTTTACTTGGAAACTCCAGA
GAAGAAGATTCTTGTAGATGCTGGTTTGTCTGGTAAGAAAATCACAAGTTTGCTAGCTGAGATTGATCGTGATCCGAGTG
ATTTGGATGCAATCTTAGTAACGCATGAACACAAGGATCACATCCATGGTGTAGGCGTTTTAGCTCGTAAATATGGCATG
GATATCTACGCCAACGAGAACACCTGGCAGATTATGGATAGTAAAAATATGCTTGGCAAGATTGATAATAGCCAGAAACA
TGTTTTTTCTCGTGATAAGCTTCTGACCTTTGGAGACCTTGATATTGAGTCTTTTGGAGTTAGTCACGATGCTATTGATC
CACAGTTCTATCGCTTTATGAAAGATGGAAAGAGTTTTGTCATGTTGACGGATACGGGTTATGTTTCTGATCGTATGGCA
GGTATTATTGAAAATGCCGATGGCTATCTGATTGAGTCCAATCATGATGTTGAAATCCTTAGAGCAGGTTCATATCCTTG
GTCGACCAAGCAACGTATCCTCTCTGATCAAGGTCATTTGTGTAATGAAGATGGAGCGGATGCTATGATTCGTACCATTG
GTAATAAAACTAAAAAGATCTACTTGGGTCACCTTTCCAAAGAAAATAATATCAAGGAGTTGGCCCACATGACGATGGAA
AATCAGTTGGCACGTGCTGACTTTGGTGTTGGAACTGACTTTAAAGTTTATGATACCTCACCAGACACAGCGACTCCACT
GACAGACATTTAA

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(29-214)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

76.866

99.259

0.763

Multiple sequence alignment