Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptB   Type   Regulator
Locus tag   SP5448_RS02110 Genome accession   NZ_CP008776
Coordinates   410382..411416 (+) Length   344 a.a.
NCBI ID   WP_010922583.1    Uniprot ID   A0A0H2UWB0
Organism   Streptococcus pyogenes strain 5448     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 405382..416416
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SP5448_RS02080 (SP5448_02155) tsaE 406456..406917 (+) 462 WP_009880751.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  SP5448_RS02085 (SP5448_02160) - 406892..407416 (+) 525 WP_009880752.1 N-acetyltransferase -
  SP5448_RS02090 (SP5448_02165) - 407425..408699 (+) 1275 WP_010922584.1 LCP family protein -
  SP5448_RS02095 (SP5448_02170) - 408810..409166 (-) 357 WP_002988657.1 hypothetical protein -
  SP5448_RS02100 (SP5448_02175) - 409163..409582 (-) 420 WP_002983376.1 HIT family protein -
  SP5448_RS02105 (SP5448_02180) pptA 409654..410379 (+) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  SP5448_RS02110 (SP5448_02185) pptB 410382..411416 (+) 1035 WP_010922583.1 ABC transporter permease Regulator
  SP5448_RS02115 (SP5448_02190) ccrZ 411480..412271 (+) 792 WP_002983385.1 cell cycle regulator CcrZ -
  SP5448_RS02120 (SP5448_02195) trmB 412271..412906 (+) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  SP5448_RS02130 (SP5448_02205) - 413104..414183 (-) 1080 WP_002988667.1 tyrosine-type recombinase/integrase -
  SP5448_RS02135 (SP5448_02210) - 414300..414851 (-) 552 WP_002988670.1 hypothetical protein -
  SP5448_RS02140 (SP5448_02215) - 414862..415245 (-) 384 WP_002988673.1 ImmA/IrrE family metallo-endopeptidase -
  SP5448_RS02145 (SP5448_02220) - 415259..415609 (-) 351 WP_002988676.1 helix-turn-helix transcriptional regulator -
  SP5448_RS09690 - 415935..416090 (+) 156 WP_002988678.1 hypothetical protein -

Sequence

Protein


Download         Length: 344 a.a.        Molecular weight: 40274.52 Da        Isoelectric Point: 10.3713

>NTDB_id=108587 SP5448_RS02110 WP_010922583.1 410382..411416(+) (pptB) [Streptococcus pyogenes strain 5448]
MKALFLKRRQDFQKQQNKYLRYVLNDHFVLVLMFLLGFAMVQYGQLLNHFPTNHLPIQVCLGILIPLLLSMGSIATYLEE
ADQHFLLPKEEEVISYIKQAERLSFLLWGTLQTAVLLFLYPIFRRLGLSLFIFIILVLILLALKRVVLSRKTRYFLRGNR
LDWAKAVAFESNRKQSILKFYSLFTTVKGISTKVKERTYLNPLLKLVKQTPSNLWLSLYARAFLRSSDYLGLFLRLMLLS
SLSVFFIHNLYLSVSLALIFNYLVVFQLLSLYYHYDYHYMTSLYPENSRSKKKNMLSFLRGLSFLMLIVNMLCCSSAPKA
LILIVGMVFIACIYLPYKLKKIID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=108587 SP5448_RS02110 WP_010922583.1 410382..411416(+) (pptB) [Streptococcus pyogenes strain 5448]
ATGAAAGCATTATTTCTGAAACGCCGTCAAGACTTTCAAAAACAACAAAACAAATACCTTCGTTACGTCTTAAATGATCA
CTTTGTTTTGGTGTTGATGTTTTTATTAGGCTTTGCTATGGTGCAGTATGGTCAGCTACTAAACCATTTTCCAACGAATC
ATCTACCTATTCAGGTTTGCCTTGGGATATTGATCCCATTATTGCTCAGTATGGGATCTATAGCAACGTATCTAGAAGAG
GCAGATCAGCATTTCTTACTTCCAAAAGAAGAAGAAGTGATTTCTTATATCAAACAAGCTGAGCGACTCTCTTTTTTGCT
TTGGGGAACTTTGCAGACTGCTGTATTGCTCTTTTTATATCCTATTTTTAGACGTTTAGGTCTGTCTTTATTTATTTTTA
TTATCTTAGTTTTGATATTATTGGCACTAAAAAGAGTAGTGCTTAGTCGAAAGACAAGATATTTTTTGAGAGGAAATCGT
TTAGATTGGGCAAAAGCTGTCGCATTTGAAAGCAATCGCAAGCAAAGTATTTTAAAGTTTTATTCTCTTTTTACAACAGT
CAAAGGAATTTCTACAAAAGTGAAAGAAAGAACTTATCTAAATCCTCTTTTAAAATTAGTTAAGCAAACTCCTTCAAACC
TTTGGCTGTCCCTTTATGCTAGAGCCTTTTTACGTAGTTCAGATTATTTGGGCTTATTTTTACGACTAATGCTATTAAGC
TCATTATCTGTATTTTTTATCCATAATCTTTATTTGTCAGTAAGTTTAGCACTCATTTTTAACTATTTAGTTGTATTCCA
ATTACTTTCCCTTTATTATCACTACGATTACCATTATATGACTAGTCTTTATCCTGAAAATAGTCGGAGCAAGAAGAAAA
ATATGTTAAGTTTTTTACGAGGTTTAAGCTTTTTAATGTTAATCGTCAATATGCTGTGTTGCTCATCAGCGCCAAAAGCA
CTCATTTTGATTGTAGGTATGGTTTTCATAGCTTGTATATATCTACCTTATAAGTTAAAGAAGATCATTGACTAA

Domains

Predicted by InterProScan.

Bacterial ABC transporter protein EcsB (EcsB)

(158-330)

Bacterial ABC transporter protein EcsB (EcsB)

(2-151)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2UWB0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

43.023

100

0.43
  pptB Streptococcus salivarius strain HSISS4

42.733

100

0.427

Multiple sequence alignment