Detailed information NTG1085855

Bioinformatically predicted

Overview

• Name: comFA/cflA
• Type: Machinery gene
• Locus tag: ACJVG6_RS01795
• Genome accession: NZ_CP177180
• Coordinates: 340111..341430 (+)
• Length: 439 a.a.
• NCBI ID: WP_002886638.1
• Uniprot ID: -
• Organism: Streptococcus salivarius strain MRD-KRBY
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 335111..346430

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACJVG6_RS01770	-	335954..336718 (+)	765	WP_002886634.1	ABC transporter ATP-binding protein	-
ACJVG6_RS01775	-	336718..337428 (+)	711	WP_002883761.1	ABC transporter ATP-binding protein	-
ACJVG6_RS01780	-	337563..338222 (+)	660	WP_002886636.1	CBS and ACT domain-containing protein	-
ACJVG6_RS01785	cysK	338402..339328 (-)	927	WP_002883742.1	cysteine synthase A	-
ACJVG6_RS01790	-	339430..340056 (-)	627	WP_002886637.1	YigZ family protein	-
ACJVG6_RS01795	comFA/cflA	340111..341430 (+)	1320	WP_002886638.1	DEAD/DEAH box helicase	Machinery gene
ACJVG6_RS01800	-	341411..342073 (+)	663	WP_002886639.1	ComF family protein	-
ACJVG6_RS01805	hpf	342152..342700 (+)	549	WP_002883786.1	ribosome hibernation-promoting factor, HPF/YfiA family	-

Sequence

Protein

• Length: 439 a.a.
• Molecular weight: 50753.90 Da
• Isoelectric Point: 9.2418

>NTDB_id=1085855 ACJVG6_RS01795 WP_002886638.1 340111..341430(+) (comFA/cflA) [Streptococcus salivarius strain MRD-KRBY]
MVPKEYYGRLFTKEQLPVDYHSEAFTLESMIKVDKQLRCKRCYSQIEEDWQLPEGQYYCRACIVFGRNQEGKELYYFPSK
TSEIEFPVLKWLGELTPYQAEVSEKLLETYQKQKDSLVHAVTGAGKTEMIYKIVAYVLGNKGRVAIASPRVDVCRELFLR
MQRDFTCSISLLHAESEPYDGSPLVIATTHQLLKFYQNFDLVIVDEVDAFPFVGNVMLNHAVEQAKKETGRYIYLTATST
ISLEEQVRLGTLEKHHLARRFHGNPLVLPKFCWQGRLQKSLMRGKLPRPLLYQIKKQRKSKFPLLIFFPNIAIGEKFTNI
LQKYLPDEKMAFVSSKSEERSTIVEKFREKELSILVTTTILERGVTFPQVDVFVCMANHHLYTSSSLIQIGGRVGRSPDR
PTGKLYFFHEGLSKSMLRCREEIKVMNKKGGFNNEVSTM

Nucleotide

• Length: 1320 bp

>NTDB_id=1085855 ACJVG6_RS01795 WP_002886638.1 340111..341430(+) (comFA/cflA) [Streptococcus salivarius strain MRD-KRBY]
ATGGTACCTAAAGAATATTATGGACGGCTATTTACGAAAGAACAGTTGCCAGTGGACTATCACTCAGAGGCTTTTACATT
AGAAAGCATGATAAAGGTCGATAAACAACTTAGATGTAAAAGATGTTACAGTCAGATAGAGGAAGATTGGCAATTACCGG
AAGGTCAGTATTATTGCAGAGCATGTATTGTCTTTGGCAGAAACCAAGAAGGAAAAGAACTTTATTATTTTCCTTCAAAA
ACATCAGAAATTGAATTTCCTGTTTTGAAGTGGTTAGGAGAACTGACTCCCTATCAAGCTGAGGTCTCAGAGAAGCTTTT
AGAAACATATCAAAAACAGAAAGACAGCCTCGTACATGCTGTGACTGGTGCTGGGAAGACCGAGATGATTTATAAAATCG
TTGCCTATGTTCTTGGAAATAAAGGTCGTGTAGCTATCGCAAGTCCTCGCGTTGATGTTTGTCGAGAGTTATTTCTACGT
ATGCAGAGGGATTTTACTTGTAGTATTTCTCTGCTTCATGCTGAGAGTGAACCATATGATGGTAGTCCGCTTGTAATAGC
TACCACCCATCAATTACTAAAGTTTTACCAGAACTTTGACCTAGTAATCGTTGATGAGGTTGATGCATTCCCTTTTGTAG
GAAATGTCATGTTAAATCATGCTGTGGAGCAGGCAAAGAAGGAAACCGGTCGCTATATTTACTTAACAGCGACTTCTACA
ATATCTTTGGAAGAGCAAGTTCGACTTGGAACTTTAGAAAAGCATCACCTTGCCAGACGTTTCCATGGAAATCCTTTAGT
ACTTCCTAAATTCTGTTGGCAGGGAAGATTACAAAAATCTCTAATGAGAGGCAAGCTTCCAAGACCCCTTCTTTATCAGA
TAAAAAAGCAACGTAAATCCAAATTCCCTTTACTAATCTTTTTTCCAAATATAGCGATAGGTGAAAAGTTTACCAATATT
CTACAAAAATATCTTCCAGATGAAAAAATGGCCTTTGTTTCTTCAAAAAGCGAGGAGCGTTCAACTATTGTAGAGAAGTT
CCGAGAAAAAGAACTATCCATCTTAGTGACAACAACTATCCTCGAACGTGGTGTGACCTTTCCACAAGTAGATGTTTTTG
TTTGCATGGCAAATCATCACTTATACACTAGTTCGAGTCTTATTCAGATTGGGGGTCGAGTTGGAAGATCCCCAGATAGA
CCGACAGGAAAGCTTTATTTCTTTCATGAAGGGCTATCCAAATCAATGCTTCGTTGTCGAGAAGAAATAAAGGTTATGAA
TAAAAAAGGAGGATTTAACAATGAAGTGTCTACTATGTAA

Domains

Predicted by InterproScan.

• Helicase conserved C-terminal domain (Helicase_C) (290-396)

• Type III restriction enzyme, res subunit (ResIII) (94-170)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA/cflA	Streptococcus pneumoniae Rx1	56.381	98.178	0.554
comFA/cflA	Streptococcus pneumoniae D39	56.381	98.178	0.554
comFA/cflA	Streptococcus pneumoniae R6	56.381	98.178	0.554
comFA/cflA	Streptococcus pneumoniae TIGR4	56.381	98.178	0.554
comFA/cflA	Streptococcus mitis NCTC 12261	55.53	98.861	0.549
comFA/cflA	Streptococcus mitis SK321	54.988	98.178	0.54
comFA	Lactococcus lactis subsp. cremoris KW2	45.952	95.672	0.44
comFA	Latilactobacillus sakei subsp. sakei 23K	38.303	99.317	0.38