Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   ACJVC4_RS10315 Genome accession   NZ_CP177179
Coordinates   2181403..2182170 (+) Length   255 a.a.
NCBI ID   WP_037598566.1    Uniprot ID   A0A2L2PBN5
Organism   Streptococcus salivarius strain MRD-NRLLH     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2176403..2187170
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACJVC4_RS10300 - 2178717..2179400 (-) 684 WP_002892206.1 YoaK family protein -
  ACJVC4_RS10305 rlmH 2179417..2179896 (-) 480 WP_037598563.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  ACJVC4_RS10310 htrA 2180102..2181337 (+) 1236 WP_002892211.1 S1C family serine protease Regulator
  ACJVC4_RS10315 spo0J 2181403..2182170 (+) 768 WP_037598566.1 ParB/RepB/Spo0J family partition protein Regulator
  ACJVC4_RS10320 dnaA 2182410..2183774 (+) 1365 WP_002889547.1 chromosomal replication initiator protein DnaA -
  ACJVC4_RS10325 dnaN 2183930..2185066 (+) 1137 WP_002883965.1 DNA polymerase III subunit beta -
  ACJVC4_RS10330 - 2185118..2185309 (+) 192 WP_002889548.1 DUF951 domain-containing protein -
  ACJVC4_RS10335 ychF 2185519..2186634 (+) 1116 WP_002883967.1 redox-regulated ATPase YchF -

Sequence


Protein


Download         Length: 255 a.a.        Molecular weight: 29379.81 Da        Isoelectric Point: 9.4081

>NTDB_id=1085838 ACJVC4_RS10315 WP_037598566.1 2181403..2182170(+) (spo0J) [Streptococcus salivarius strain MRD-NRLLH]
MQEQLKALPISEIYPNPFQPRIEFSDEELAELSQSIAENGLIQPIIVRKSDIIGYELIAGERRLRACKRLGMTEIPAVVK
EVSDQESRKQAIIENLQRSNLNPIEEAKAYRSLINELAYSHEELAKAMGKSRPYISNALRLLQLPKEIQTSIENGKLSQG
HARALLSVEDTQKQLTIYHQVLTEKWSVRTLEKRLQELPKKQKSKKDIHIKDKEKELEKSLGLPVTLRYHKNHSGTIQIH
FSTEEDFNRIINKLI

Nucleotide


Download         Length: 768 bp        

>NTDB_id=1085838 ACJVC4_RS10315 WP_037598566.1 2181403..2182170(+) (spo0J) [Streptococcus salivarius strain MRD-NRLLH]
ATGCAAGAACAACTCAAAGCTTTACCTATTAGTGAAATCTACCCAAATCCTTTTCAACCTCGTATAGAATTCTCTGATGA
AGAATTAGCAGAACTGAGCCAATCAATCGCTGAAAATGGACTGATACAGCCAATCATTGTCCGAAAATCGGACATTATTG
GTTATGAACTAATTGCTGGGGAAAGACGTTTACGTGCCTGTAAACGTCTGGGAATGACAGAAATCCCTGCAGTCGTAAAG
GAAGTATCAGATCAAGAGAGTCGTAAACAAGCTATTATTGAAAATTTACAACGCTCGAATCTCAATCCTATTGAAGAAGC
AAAGGCCTATCGTAGTTTGATTAATGAGTTAGCTTACAGTCACGAGGAACTGGCAAAAGCTATGGGGAAATCCAGGCCCT
ATATCAGTAACGCTCTCAGACTCCTCCAACTTCCCAAAGAGATACAGACAAGTATCGAAAATGGCAAACTGAGTCAAGGA
CATGCTAGAGCGCTTTTATCTGTTGAGGATACCCAAAAGCAATTAACTATCTATCATCAGGTGCTTACTGAAAAATGGTC
CGTTCGTACTCTGGAAAAAAGACTTCAAGAACTTCCTAAAAAACAAAAATCAAAAAAAGATATTCACATAAAAGATAAAG
AAAAAGAACTAGAAAAATCACTTGGTCTCCCCGTTACTCTTCGTTATCACAAAAATCACTCTGGAACTATTCAGATCCAC
TTTTCGACGGAAGAAGATTTTAACAGAATTATCAACAAGCTAATTTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A2L2PBN5

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

58.039

100

0.58


Multiple sequence alignment