Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   ACJVC4_RS02210 Genome accession   NZ_CP177179
Coordinates   425816..427594 (+) Length   592 a.a.
NCBI ID   WP_002890103.1    Uniprot ID   J7TH49
Organism   Streptococcus salivarius strain MRD-NRLLH     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 420816..432594
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACJVC4_RS02190 - 421271..422812 (+) 1542 WP_080583687.1 hypothetical protein -
  ACJVC4_RS02195 - 422968..423378 (+) 411 WP_002890100.1 peptide deformylase -
  ACJVC4_RS02200 rcrR 423565..424008 (+) 444 WP_002890101.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  ACJVC4_RS02205 rcrP 424012..425826 (+) 1815 WP_002890102.1 ABC transporter ATP-binding protein Regulator
  ACJVC4_RS02210 rcrQ 425816..427594 (+) 1779 WP_002890103.1 ABC transporter ATP-binding protein Regulator
  ACJVC4_RS02215 - 427702..428325 (+) 624 WP_002890105.1 GNAT family N-acetyltransferase -
  ACJVC4_RS02220 - 428475..429098 (+) 624 WP_002890107.1 GTP pyrophosphokinase family protein -
  ACJVC4_RS02225 - 429100..429777 (+) 678 WP_002890109.1 response regulator transcription factor -
  ACJVC4_RS02230 - 429791..431014 (+) 1224 WP_002890110.1 sensor histidine kinase -
  ACJVC4_RS02235 pyrH 431251..431988 (+) 738 WP_002885551.1 UMP kinase -
  ACJVC4_RS02240 frr 432003..432560 (+) 558 WP_002885567.1 ribosome recycling factor -

Sequence

Protein


Download         Length: 592 a.a.        Molecular weight: 65017.96 Da        Isoelectric Point: 4.9468

>NTDB_id=1085790 ACJVC4_RS02210 WP_002890103.1 425816..427594(+) (rcrQ) [Streptococcus salivarius strain MRD-NRLLH]
MENKPKTSSYKRLKPYIKGFPIPFVLAIVGAIISAVITVIGPDKLKEITNTITEGITPTKMGTIPGIDLDKVTSIAMTLA
VLYAISAIVGYLQSFTVATVTQRFSQRFRTAIQKKINSVPLNYFDSHSQGDTLSRVTNDVDLLGQSLSQGLGTLITSSVL
LVAAIIMMFYSNVTMAFTAIGSVLIGFVLVAFIMGFSQPLFKRQQENLANINGYIEEIYTGQAVVTSYNVSEESSQAFKG
LNDKLYKSMWQSQFISGIMMPLMIFIGNFGYVMVCLVGAIKVIDGSLTIGDVVAFMTYVRIFSQPLSQIAQGITQLQSAT
AAIGRIFEFLEEKDMDDESSKTAELTDTKGQVVFDHVSFGYTPEKTIIHDFSALAKPGQKIAIVGPTGAGKTTIVNLLMK
FYNIDQGHITIDGVDTGDMKRETVHDQFSMVLQDTWLFEGTIRDNLIYNQENISDEQVIAAAKAVGVHHLITTLPKGYDT
YLDDSVTLSVGQKQLLTIARALLKDAPLLILDEATSSVDTRTEELIQKAMDKLMEGRTSFVIAHRLSTIRNADLILVMKD
GNIIEQGNHDELMAADGFYADLYNSQFTEEVA

Nucleotide


Download         Length: 1779 bp        

>NTDB_id=1085790 ACJVC4_RS02210 WP_002890103.1 425816..427594(+) (rcrQ) [Streptococcus salivarius strain MRD-NRLLH]
ATGGAAAATAAACCAAAAACATCGTCCTATAAACGCTTAAAACCCTATATTAAAGGTTTCCCAATTCCCTTTGTCCTTGC
GATTGTTGGAGCAATTATTTCAGCAGTCATTACAGTTATTGGACCAGATAAGCTTAAAGAAATTACCAATACTATTACTG
AAGGTATTACACCTACCAAAATGGGGACGATTCCAGGTATTGATTTGGATAAGGTGACAAGTATTGCTATGACCTTGGCT
GTTCTCTATGCCATTTCAGCGATTGTGGGTTACTTACAAAGCTTTACGGTTGCGACGGTTACACAACGCTTTTCACAACG
TTTCCGTACAGCTATCCAAAAGAAAATCAACAGTGTTCCCCTTAATTATTTTGACAGTCATTCTCAAGGGGACACCCTCT
CTCGTGTGACTAATGACGTTGACCTTTTGGGACAATCTCTTAGTCAAGGTCTGGGTACCCTAATTACTTCAAGTGTTCTC
TTGGTCGCAGCTATTATTATGATGTTTTATTCAAATGTCACTATGGCTTTCACTGCGATTGGTTCTGTCTTGATAGGATT
TGTTCTAGTAGCCTTCATCATGGGTTTCTCACAACCCCTTTTCAAACGTCAACAAGAAAATTTGGCTAACATTAATGGAT
ATATTGAAGAAATCTACACAGGTCAAGCAGTTGTAACGAGTTACAATGTATCTGAAGAAAGTAGTCAAGCTTTCAAGGGG
CTTAATGATAAGCTCTATAAATCGATGTGGCAATCTCAGTTTATCTCAGGTATTATGATGCCACTTATGATTTTCATTGG
GAACTTTGGTTACGTCATGGTCTGTCTTGTGGGAGCTATTAAGGTTATTGATGGTAGCTTGACTATTGGTGATGTGGTGG
CTTTCATGACTTATGTTCGTATTTTCTCACAACCTCTTTCTCAAATTGCACAAGGGATTACGCAACTTCAGTCAGCCACT
GCAGCTATTGGTCGTATCTTTGAATTTTTGGAAGAAAAAGATATGGATGACGAATCAAGTAAGACAGCTGAATTGACAGA
TACTAAAGGTCAAGTTGTCTTTGATCATGTTTCCTTTGGTTATACTCCTGAAAAAACTATTATTCATGATTTTTCAGCTC
TTGCTAAGCCAGGTCAAAAGATTGCGATTGTTGGTCCAACAGGTGCTGGTAAGACGACTATTGTTAACTTGCTTATGAAG
TTCTATAACATCGATCAAGGCCATATCACCATTGACGGTGTGGATACTGGCGACATGAAACGTGAAACTGTCCATGATCA
ATTCTCTATGGTGCTTCAGGACACTTGGCTCTTTGAAGGTACTATTCGTGATAATTTAATTTACAACCAAGAAAATATCT
CTGACGAGCAAGTTATTGCTGCAGCCAAGGCTGTCGGTGTTCACCACCTTATCACCACACTTCCAAAAGGTTATGATACT
TATTTGGATGACTCTGTGACATTATCAGTTGGTCAGAAACAGCTCTTGACCATTGCACGTGCCCTTCTGAAGGATGCCCC
TCTTCTTATCTTGGATGAAGCGACATCATCTGTTGACACCAGAACAGAAGAATTGATTCAAAAAGCCATGGACAAACTTA
TGGAAGGTCGGACTTCCTTTGTCATTGCTCACCGCTTATCAACCATTCGAAATGCTGATCTAATCCTTGTGATGAAAGAT
GGGAATATTATTGAACAAGGAAATCATGATGAGCTCATGGCAGCAGATGGTTTCTATGCTGATCTTTATAATAGTCAATT
TACAGAAGAAGTTGCCTAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(25-306)

ABC transporter (ABC_tran)

(371-516)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB J7TH49

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

68.581

100

0.686

Multiple sequence alignment