Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   ACJVC4_RS02205 Genome accession   NZ_CP177179
Coordinates   424012..425826 (+) Length   604 a.a.
NCBI ID   WP_002890102.1    Uniprot ID   J7T6A0
Organism   Streptococcus salivarius strain MRD-NRLLH     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 419012..430826
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACJVC4_RS02185 gdhA 419632..420984 (+) 1353 WP_037597452.1 NADP-specific glutamate dehydrogenase -
  ACJVC4_RS02190 - 421271..422812 (+) 1542 WP_080583687.1 hypothetical protein -
  ACJVC4_RS02195 - 422968..423378 (+) 411 WP_002890100.1 peptide deformylase -
  ACJVC4_RS02200 rcrR 423565..424008 (+) 444 WP_002890101.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  ACJVC4_RS02205 rcrP 424012..425826 (+) 1815 WP_002890102.1 ABC transporter ATP-binding protein Regulator
  ACJVC4_RS02210 rcrQ 425816..427594 (+) 1779 WP_002890103.1 ABC transporter ATP-binding protein Regulator
  ACJVC4_RS02215 - 427702..428325 (+) 624 WP_002890105.1 GNAT family N-acetyltransferase -
  ACJVC4_RS02220 - 428475..429098 (+) 624 WP_002890107.1 GTP pyrophosphokinase family protein -
  ACJVC4_RS02225 - 429100..429777 (+) 678 WP_002890109.1 response regulator transcription factor -

Sequence

Protein


Download         Length: 604 a.a.        Molecular weight: 67055.60 Da        Isoelectric Point: 5.9416

>NTDB_id=1085789 ACJVC4_RS02205 WP_002890102.1 424012..425826(+) (rcrP) [Streptococcus salivarius strain MRD-NRLLH]
MFKIFKRLTAKELSMIILAVIFVCLNVYLNLKIPDYMSDITTLLSTKGTKASDIFAWNTDAPGMRMLLMSFAGFMASVVV
GFLAARTAASFTTRLRDDIFHQVLDFSDAEIKQFSIPSLLTRTTNDITQLQMVLIMGLQVITQGPIMAIWAITKIADKNG
NWLLALLVAVAVIAVLMLFLLIMVMPKQRLIQTLTDKLNSVTRESLTGIRVVRAYNAESYQEDKFEKANTDLTQNNLFIG
RSFALLTPVMTAVSSGLTLAIYWIGAHLIEDVKIPTDPTKITGALEDKVHLFSDMVVYSSYAMQVVMGFMMMIVVFFLLP
RAVVAAGRINEVLDTQSSVSYPENSSEKPKDVGTVEFDDVSFRYSETSEPVLEHVSFKAKKGDTVAFIGSTGSGKSTLVN
LIPRFYDATQGTIKVDGVDVRHYDHETLHNIVGYIPQKAVLFSGNITSNMTMGTSNNSPLDDAKIWEALELAQGKDFVEN
KEGQLKAEVAQSGSNFSGGQKQRLAIARALARKPEILIFDDSFSALDYKTDRKLRQELSEKTQDMTKLIVAQRISTIMDA
DQILVLDQGKVVGQGTHRELLANNEVYQEIAYSQLSKEELENGK

Nucleotide


Download         Length: 1815 bp        

>NTDB_id=1085789 ACJVC4_RS02205 WP_002890102.1 424012..425826(+) (rcrP) [Streptococcus salivarius strain MRD-NRLLH]
ATGTTTAAAATTTTTAAACGTTTGACAGCAAAAGAGTTAAGCATGATTATCTTAGCTGTGATATTTGTTTGTTTGAACGT
CTATCTAAACTTGAAAATTCCAGACTATATGTCTGACATTACGACCCTATTATCAACCAAGGGGACTAAGGCGTCGGATA
TTTTTGCCTGGAATACAGATGCCCCAGGGATGCGAATGCTTTTAATGTCCTTTGCGGGCTTTATGGCCTCAGTAGTGGTT
GGTTTCCTAGCTGCCAGAACAGCAGCAAGTTTTACAACCCGTCTTCGTGATGATATCTTCCATCAAGTTCTAGATTTTTC
GGATGCAGAGATTAAGCAATTCTCCATTCCTAGTCTTTTGACCCGCACGACAAATGATATTACCCAATTACAGATGGTAC
TGATCATGGGATTACAGGTCATTACACAGGGGCCTATCATGGCCATTTGGGCGATTACAAAGATTGCCGATAAAAATGGA
AATTGGCTCCTTGCCTTGCTTGTCGCTGTGGCAGTGATTGCCGTTCTCATGCTCTTCCTCTTAATTATGGTTATGCCTAA
GCAACGCTTGATTCAAACTCTGACCGATAAACTGAATAGCGTAACGCGTGAATCTCTTACAGGGATTCGTGTGGTGCGTG
CCTACAACGCCGAAAGTTATCAAGAGGATAAATTTGAAAAGGCCAATACTGATTTGACCCAAAACAACCTCTTTATCGGT
CGTTCTTTTGCCTTACTAACACCGGTAATGACTGCTGTATCCAGCGGTTTGACACTGGCTATTTATTGGATTGGTGCGCA
TCTGATTGAAGATGTTAAGATTCCAACAGATCCAACGAAAATTACTGGTGCCTTGGAAGACAAGGTCCATCTCTTCTCAG
ATATGGTTGTCTATTCGTCTTATGCCATGCAGGTTGTTATGGGATTCATGATGATGATTGTCGTTTTCTTCCTTCTTCCA
CGTGCCGTTGTAGCAGCTGGCCGTATCAATGAAGTTTTAGATACCCAATCTTCAGTCTCTTACCCTGAAAATAGTTCTGA
AAAACCTAAAGACGTGGGCACTGTCGAATTCGATGATGTTTCCTTCCGTTATTCTGAAACTTCAGAGCCTGTTTTGGAGC
ATGTTAGCTTCAAAGCTAAAAAGGGTGACACGGTTGCCTTTATTGGTTCGACTGGATCTGGTAAATCAACGCTTGTCAAC
CTTATCCCACGATTTTATGATGCCACGCAAGGAACTATCAAGGTTGACGGTGTGGATGTACGACATTATGACCACGAAAC
CTTGCACAATATAGTCGGTTATATTCCACAAAAGGCTGTGCTTTTCTCAGGTAATATCACGTCAAATATGACAATGGGAA
CGAGCAATAATAGTCCTCTAGATGACGCTAAAATTTGGGAAGCTCTCGAATTGGCTCAAGGAAAAGACTTTGTTGAAAAT
AAAGAAGGCCAACTTAAGGCAGAAGTGGCTCAATCTGGGTCTAACTTCTCAGGTGGCCAGAAGCAACGTTTGGCTATTGC
GCGTGCACTTGCCCGTAAGCCTGAAATCTTGATTTTTGACGATTCCTTCTCAGCTTTGGACTATAAGACCGATCGTAAAC
TGCGTCAAGAATTGTCTGAAAAAACACAAGATATGACCAAGTTGATTGTTGCTCAACGTATCTCTACTATTATGGATGCT
GATCAAATCTTGGTACTTGATCAAGGTAAAGTAGTCGGGCAAGGAACCCACAGGGAACTCTTGGCTAACAATGAGGTTTA
CCAAGAAATTGCTTATTCACAATTGTCTAAGGAGGAGTTAGAAAATGGAAAATAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(16-271)

ABC transporter (ABC_tran)

(372-522)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB J7T6A0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

67.934

100

0.68

Multiple sequence alignment