Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   ACLHWD_RS05405 Genome accession   NZ_CP177121
Coordinates   1113123..1114409 (+) Length   428 a.a.
NCBI ID   WP_193990784.1    Uniprot ID   -
Organism   Vagococcus salmoninarum strain 2022-418     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1108123..1119409
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLHWD_RS05380 (ACLHWD_05380) pyrH 1108782..1109504 (+) 723 WP_126781960.1 UMP kinase -
  ACLHWD_RS05385 (ACLHWD_05385) frr 1109507..1110064 (+) 558 WP_126781958.1 ribosome recycling factor -
  ACLHWD_RS05390 (ACLHWD_05390) - 1110277..1111095 (+) 819 WP_193990780.1 isoprenyl transferase -
  ACLHWD_RS05395 (ACLHWD_05395) - 1111102..1111908 (+) 807 WP_126781954.1 phosphatidate cytidylyltransferase -
  ACLHWD_RS05400 (ACLHWD_05400) dxr 1111966..1113126 (+) 1161 WP_193990782.1 1-deoxy-D-xylulose-5-phosphate reductoisomerase -
  ACLHWD_RS05405 (ACLHWD_05405) eeP 1113123..1114409 (+) 1287 WP_193990784.1 RIP metalloprotease RseP Regulator
  ACLHWD_RS05410 (ACLHWD_05410) - 1114456..1116171 (+) 1716 WP_193990786.1 proline--tRNA ligase -

Sequence


Protein


Download         Length: 428 a.a.        Molecular weight: 47125.16 Da        Isoelectric Point: 6.5145

>NTDB_id=1085402 ACLHWD_RS05405 WP_193990784.1 1113123..1114409(+) (eeP) [Vagococcus salmoninarum strain 2022-418]
MKTILTFIFVFCVIVIVHELGHFLFAKWSGILVREFSIGMGPKLFAHQGKDGTTYTIRMLPIGGYVRMAGLGEEEVEINP
GQPLSLELDENQIVKRINTSSKVQLANSIPIEVTAFDLEKDLFIKGNIYGDERKEVTYQVDHDATIIESDGTEVRIAPLD
VQFQSAKLYKRMLTNFAGPMFNFLLTFVIFIVILFAQGGNRTADPSSTIGSLVPDSVAEKAGILPGDRVLEVNGQEIATF
EALTKKIQSSADQELKLLVQRGDKTETITLTPETQKTDDGKTQVVLGIYSSYKLEKLSFSGKLKAAVSQTITSAMAIFVA
LKGLLTGFSLNKLGGPVMIFQVSSQVAQQGFMVVLGFMATLSVNLGIMNLLPIPALDGGKLLLNLVEGVRRKPLSPESEG
KITIFGFAFMMILMVLVTWNDIMRFFFR

Nucleotide


Download         Length: 1287 bp        

>NTDB_id=1085402 ACLHWD_RS05405 WP_193990784.1 1113123..1114409(+) (eeP) [Vagococcus salmoninarum strain 2022-418]
ATGAAAACTATTTTAACTTTTATTTTTGTTTTTTGTGTGATCGTGATTGTTCACGAATTAGGGCACTTTCTATTTGCAAA
ATGGTCAGGGATCTTAGTGAGAGAATTTTCGATTGGGATGGGGCCAAAATTGTTCGCTCATCAAGGTAAAGATGGCACAA
CTTATACGATCCGTATGTTGCCAATTGGCGGTTATGTCCGGATGGCTGGCTTAGGAGAAGAGGAAGTTGAAATCAATCCA
GGCCAACCTTTGTCTTTAGAATTAGACGAAAACCAAATCGTTAAACGGATCAACACTAGTAGTAAAGTTCAGTTAGCCAA
TAGTATCCCAATTGAAGTGACAGCCTTTGATTTAGAAAAGGACTTGTTTATTAAAGGGAATATTTATGGCGATGAGCGGA
AAGAAGTGACTTACCAAGTCGATCATGATGCAACAATTATTGAAAGTGACGGCACTGAAGTTCGGATTGCTCCCTTAGAC
GTCCAGTTCCAATCGGCGAAACTATACAAGCGGATGCTGACAAACTTTGCCGGTCCAATGTTCAACTTTTTGTTAACATT
TGTCATTTTTATCGTCATCTTGTTTGCTCAAGGTGGAAATCGGACGGCAGATCCTAGTAGCACCATTGGCAGTTTAGTCC
CTGACAGCGTTGCTGAGAAAGCTGGGATTCTACCAGGCGATCGGGTATTAGAAGTTAACGGTCAAGAAATTGCCACATTT
GAGGCATTAACTAAAAAAATTCAAAGTTCGGCAGACCAAGAACTAAAGTTGTTAGTTCAACGTGGTGATAAAACTGAAAC
GATTACGTTAACACCAGAAACGCAAAAGACCGATGATGGCAAAACACAAGTTGTTTTAGGGATTTATTCTAGCTATAAGT
TAGAGAAATTGTCTTTTAGTGGTAAGTTAAAAGCAGCCGTAAGCCAAACAATCACTAGTGCTATGGCGATTTTTGTCGCT
TTAAAAGGCTTGTTAACGGGCTTTAGTTTAAACAAACTAGGTGGACCAGTGATGATTTTTCAAGTGTCTTCACAAGTTGC
ACAACAAGGCTTTATGGTTGTTTTAGGCTTTATGGCAACTTTAAGTGTCAACTTAGGAATTATGAATTTATTACCGATTC
CTGCTTTAGATGGCGGTAAGTTATTACTGAACTTAGTCGAAGGGGTTAGAAGAAAGCCTTTAAGTCCAGAAAGTGAAGGG
AAAATCACGATTTTTGGTTTCGCTTTTATGATGATTTTAATGGTTTTAGTTACTTGGAATGATATTATGCGTTTTTTCTT
TAGATAA

Domains


Predicted by InterproScan.

(6-413)

(209-261)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

47.806

100

0.484

  eeP Streptococcus thermophilus LMG 18311

47.806

100

0.484


Multiple sequence alignment