Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   ACK3B6_RS02165 Genome accession   NZ_CP176792
Coordinates   429846..430796 (+) Length   316 a.a.
NCBI ID   WP_010333025.1    Uniprot ID   -
Organism   Bacillus halotolerans strain BCP32     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 424846..435796
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACK3B6_RS02140 (ACK3B6_02140) rapC 426236..427384 (+) 1149 WP_024120212.1 response regulator aspartate phosphatase RapC Regulator
  ACK3B6_RS02145 (ACK3B6_02145) phrC 427368..427490 (+) 123 WP_024120213.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  ACK3B6_RS02150 (ACK3B6_02150) - 427596..427688 (-) 93 WP_083504413.1 YjcZ family sporulation protein -
  ACK3B6_RS02155 (ACK3B6_02155) - 427835..427945 (-) 111 WP_024120215.1 YjcZ family sporulation protein -
  ACK3B6_RS02160 (ACK3B6_02160) - 428097..429461 (-) 1365 WP_059291959.1 aspartate kinase -
  ACK3B6_RS02165 (ACK3B6_02165) ceuB 429846..430796 (+) 951 WP_010333025.1 petrobactin ABC transporter permease YclN Machinery gene
  ACK3B6_RS02170 (ACK3B6_02170) yclO 430789..431736 (+) 948 WP_202853232.1 petrobactin ABC transporter permease YclO -
  ACK3B6_RS02175 (ACK3B6_02175) yclP 431730..432488 (+) 759 WP_202853233.1 petrobactin ABC transporter ATP-binding protein YclP -
  ACK3B6_RS02180 (ACK3B6_02180) - 432510..433463 (+) 954 WP_202853234.1 siderophore ABC transporter substrate-binding protein -
  ACK3B6_RS02185 (ACK3B6_02185) - 433512..434930 (-) 1419 WP_202853235.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 35011.45 Da        Isoelectric Point: 9.8262

>NTDB_id=1082970 ACK3B6_RS02165 WP_010333025.1 429846..430796(+) (ceuB) [Bacillus halotolerans strain BCP32]
MKLRYLFFLLIILAVTSVFIGVEDLSPLDLFDLSKEEASTLFASRLPRLISILIAGMSMSICGLIMQQITRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLMKMLIAFVFALVGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTVAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKNSLPHTALLGAVFVLFCDILGRVIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=1082970 ACK3B6_RS02165 WP_010333025.1 429846..430796(+) (ceuB) [Bacillus halotolerans strain BCP32]
ATGAAGCTACGTTACTTATTTTTTCTACTTATCATATTAGCAGTCACTTCTGTATTTATCGGCGTAGAAGATCTGTCGCC
GCTTGATCTCTTTGATTTAAGCAAAGAAGAGGCGTCAACGCTCTTTGCCAGCCGTTTGCCGCGGCTGATCAGCATTCTAA
TCGCGGGCATGAGCATGAGCATCTGCGGACTGATTATGCAGCAGATCACCAGAAACAAATTCGTGTCACCGACAACGGCC
GGCACGATGGACTGGGCGAGGCTGGGAATCTTAATATCCTTGCTTCTGTTTACATCGGCAAGTCCTTTAATGAAAATGCT
GATTGCTTTTGTCTTTGCTTTAGTCGGCAATTTTCTGTTTATGAAAATTCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTAGTCGGTTTAATGCTCGGGAATATCGTCAGCTCAATCGCGACGTTTATCGCGTATAAATATGACCTGATC
CAGAACGTGTCATCATGGCTTCAGGGGGATTTCTCCTTAGTTGTGAAAGGGAGATACGAACTTCTTTACCTAAGTATTCC
GCTTGTCATCATTGCCTATGTTTATGCGGATAAATTTACAGTGGCGGGTATGGGAGAAAGCTTTTCTGTCAACCTCGGCC
TCAAGTATAAACGGGTTGTCAACATCGGGCTCATTATCGTATCCCTGATTACGTCACTTGTCATTTTGACTGTCGGTATG
CTTCCGTTCCTCGGTTTAATCATCCCGAACATTGTATCGATTTACAGGGGAGACAACCTGAAAAACAGCCTGCCGCACAC
TGCGCTGCTGGGAGCGGTTTTTGTTCTGTTTTGCGATATATTGGGCAGAGTCATTATCTTCCCATATGAAATCTCGATTG
GTCTAATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCGTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.797

100

0.538

Multiple sequence alignment