Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ACLH0J_RS07400 Genome accession   NZ_CP176771
Coordinates   1606336..1606743 (-) Length   135 a.a.
NCBI ID   WP_010564379.1    Uniprot ID   A0A7Y8D5M8
Organism   Pseudomonas sp. MPB23     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1601336..1611743
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLH0J_RS07385 (ACLH0J_07385) - 1603339..1605390 (-) 2052 WP_411391456.1 methyl-accepting chemotaxis protein -
  ACLH0J_RS07390 (ACLH0J_07390) - 1605387..1605911 (-) 525 WP_411391457.1 chemotaxis protein CheW -
  ACLH0J_RS07395 (ACLH0J_07395) pilH 1605924..1606289 (-) 366 WP_010564378.1 twitching motility response regulator PilH -
  ACLH0J_RS07400 (ACLH0J_07400) pilG 1606336..1606743 (-) 408 WP_010564379.1 twitching motility response regulator PilG Regulator
  ACLH0J_RS07405 (ACLH0J_07405) gshB 1606983..1607936 (+) 954 WP_411391458.1 glutathione synthase -
  ACLH0J_RS07410 (ACLH0J_07410) - 1608014..1608919 (+) 906 WP_411391459.1 energy transducer TonB -
  ACLH0J_RS07415 (ACLH0J_07415) - 1609009..1609578 (+) 570 WP_411391460.1 YqgE/AlgH family protein -
  ACLH0J_RS07420 (ACLH0J_07420) ruvX 1609578..1610015 (+) 438 WP_005792259.1 Holliday junction resolvase RuvX -
  ACLH0J_RS07425 (ACLH0J_07425) pyrR 1610100..1610606 (+) 507 WP_411391461.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  ACLH0J_RS07430 (ACLH0J_07430) - 1610631..1611635 (+) 1005 WP_411391462.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14906.40 Da        Isoelectric Point: 7.3842

>NTDB_id=1082856 ACLH0J_RS07400 WP_010564379.1 1606336..1606743(-) (pilG) [Pseudomonas sp. MPB23]
MEQHSNALRVMVIDDSKTIRRTAETLLKNVGCDVITAIDGFDALARIVDHHPHIIFVDIMMPRLDGYQTCALVKNNPAFK
SIPVIMLSSKDGLFDKAKGRIVGVDQFLTKPFSKEELLGAIKAYVPGFAAVEQAH

Nucleotide


Download         Length: 408 bp        

>NTDB_id=1082856 ACLH0J_RS07400 WP_010564379.1 1606336..1606743(-) (pilG) [Pseudomonas sp. MPB23]
ATGGAACAGCATTCCAACGCCTTGAGAGTGATGGTGATCGACGATTCGAAAACGATCCGTCGCACTGCCGAGACCTTGTT
GAAGAACGTGGGCTGCGATGTCATCACGGCCATCGACGGTTTCGATGCCCTGGCCAGGATTGTGGATCATCACCCGCACA
TTATCTTTGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACGTGCGCCCTGGTGAAGAACAACCCGGCGTTCAAG
TCGATCCCGGTGATCATGCTGTCCTCCAAGGACGGGCTGTTCGACAAGGCCAAGGGGCGTATCGTCGGTGTCGATCAGTT
TTTGACCAAGCCTTTCAGCAAGGAAGAGCTGCTGGGTGCGATCAAGGCCTACGTGCCTGGGTTCGCCGCAGTAGAACAAG
CACACTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7Y8D5M8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

70.4

92.593

0.652
  vicR Streptococcus mutans UA159

38.889

93.333

0.363

Multiple sequence alignment