Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   AACH71_RS10695 Genome accession   NZ_AP029050
Coordinates   2111748..2112698 (-) Length   316 a.a.
NCBI ID   WP_040084171.1    Uniprot ID   -
Organism   Bacillus stercoris strain BST19     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2106748..2117698
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AACH71_RS10675 (BSB_20760) - 2107615..2109033 (+) 1419 WP_014662777.1 MDR family MFS transporter -
  AACH71_RS10680 (BSB_20770) yclQ 2109081..2110034 (-) 954 WP_014662776.1 petrobactin ABC transporter substrate-binding protein YclQ -
  AACH71_RS10685 (BSB_20780) yclP 2110056..2110814 (-) 759 WP_014662775.1 petrobactin ABC transporter ATP-binding protein YclP -
  AACH71_RS10690 (BSB_20790) yclO 2110808..2111755 (-) 948 WP_040084169.1 petrobactin ABC transporter permease YclO -
  AACH71_RS10695 (BSB_20800) ceuB 2111748..2112698 (-) 951 WP_040084171.1 petrobactin ABC transporter permease YclN Machinery gene
  AACH71_RS10700 (BSB_20810) - 2113083..2114447 (+) 1365 WP_136654856.1 aspartate kinase -
  AACH71_RS10705 - 2114590..2114700 (+) 111 WP_040084173.1 YjcZ family sporulation protein -
  AACH71_RS10710 (BSB_20820) phrC 2114797..2114919 (-) 123 WP_014662771.1 phosphatase RapC inhibitor PhrC Regulator
  AACH71_RS10715 (BSB_20830) rapC 2114903..2116051 (-) 1149 WP_014662770.1 response regulator aspartate phosphatase RapC Regulator
  AACH71_RS10720 (BSB_20840) yclK 2116214..2117635 (-) 1422 WP_136654857.1 two-component system sensor histidine kinase YclK -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34871.27 Da        Isoelectric Point: 9.9364

>NTDB_id=108268 AACH71_RS10695 WP_040084171.1 2111748..2112698(-) (ceuB) [Bacillus stercoris strain BST19]
MKLRYLFILLIILAITSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTALLGAVFVLFCDILGRVIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=108268 AACH71_RS10695 WP_040084171.1 2111748..2112698(-) (ceuB) [Bacillus stercoris strain BST19]
ATGAAGCTACGTTATTTATTTATTCTACTTATCATATTAGCCATCACATCTGTATTTATCGGCGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGCTGTTTGCAAGCCGTTTGCCGCGATTAATCAGCATTGTCA
TCGCGGGCTTAAGCATGAGCATCTGCGGCTTGATTATGCAGCAGATCAGCAGAAACAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCTCGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCCGCCAGTCCTTTAATCAAAATGCT
GGTCGCGTTTGTCTTTGCCCTAGCAGGCAACTTCCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACTTTTATCGCGTATAAATATGACTTGATC
CAGAACGTGTCATCATGGCTTCAGGGAGACTTCTCCTTAGTCGTGAAAGGGAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGAGAAAGCTTTTCTGTCAATCTCGGCC
TAAAATACAAGCGGGTAGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCTCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGCGCTATTGGGAGCGGTTTTTGTGCTGTTTTGCGATATATTGGGCAGAGTTATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCGTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.532

100

0.525

Multiple sequence alignment