Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | ACK2V1_RS03260 | Genome accession | NZ_CP176715 |
| Coordinates | 651142..651537 (+) | Length | 131 a.a. |
| NCBI ID | WP_000932694.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain GTVSS-007 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 646142..656537
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACK2V1_RS03230 (ACK2V1_03230) | - | 647400..647804 (+) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
| ACK2V1_RS03235 (ACK2V1_03235) | - | 648142..648234 (+) | 93 | WP_001790611.1 | hypothetical protein | - |
| ACK2V1_RS03240 (ACK2V1_03240) | - | 648366..648599 (+) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| ACK2V1_RS03245 (ACK2V1_03245) | murA | 648710..649975 (+) | 1266 | WP_000358006.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| ACK2V1_RS03250 (ACK2V1_03250) | fabZ | 650009..650449 (+) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| ACK2V1_RS03255 (ACK2V1_03255) | - | 650508..650948 (-) | 441 | WP_193432335.1 | YwpF-like family protein | - |
| ACK2V1_RS03260 (ACK2V1_03260) | ssb | 651142..651537 (+) | 396 | WP_000932694.1 | single-stranded DNA-binding protein | Machinery gene |
| ACK2V1_RS03265 (ACK2V1_03265) | sceD | 651926..652621 (+) | 696 | WP_000752005.1 | lytic transglycosylase SceD | - |
| ACK2V1_RS03270 (ACK2V1_03270) | tenA | 653008..653697 (+) | 690 | WP_000396077.1 | thiaminase II | - |
| ACK2V1_RS03275 (ACK2V1_03275) | thiD | 653690..654520 (+) | 831 | WP_000594954.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| ACK2V1_RS03280 (ACK2V1_03280) | thiM | 654504..655295 (+) | 792 | WP_001108483.1 | hydroxyethylthiazole kinase | - |
| ACK2V1_RS03285 (ACK2V1_03285) | thiE | 655297..655938 (+) | 642 | WP_000483153.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15042.09 Da Isoelectric Point: 5.6824
>NTDB_id=1082615 ACK2V1_RS03260 WP_000932694.1 651142..651537(+) (ssb) [Staphylococcus aureus strain GTVSS-007]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=1082615 ACK2V1_RS03260 WP_000932694.1 651142..651537(+) (ssb) [Staphylococcus aureus strain GTVSS-007]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus MW2 |
99.237 |
100 |
0.992 |