Detailed information NTG0108258

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: AACH71_RS06700
• Genome accession: NZ_AP029050
• Coordinates: 1307395..1308348 (-)
• Length: 317 a.a.
• NCBI ID: WP_014663517.1
• Uniprot ID: -
• Organism: Bacillus stercoris strain BST19
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1302395..1313348

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AACH71_RS06670 (BSB_13160)	appD	1302528..1303514 (-)	987	WP_040083455.1	oligopeptide ABC transporter ATP-binding protein AppD	-
AACH71_RS06675 (BSB_13170)	-	1303705..1304490 (-)	786	WP_136654677.1	DUF2268 domain-containing protein	-
AACH71_RS06680 (BSB_13180)	fabF	1304565..1305806 (-)	1242	WP_040083457.1	beta-ketoacyl-ACP synthase II	-
AACH71_RS06685 (BSB_13190)	fabH	1305829..1306767 (-)	939	WP_014663519.1	beta-ketoacyl-ACP synthase III	-
AACH71_RS06690 (BSB_13200)	-	1306932..1307159 (+)	228	WP_080478200.1	hypothetical protein	-
AACH71_RS06695 (BSB_13210)	comZ	1307189..1307380 (-)	192	WP_003224559.1	ComG operon transcriptional repressor ComZ	Regulator
AACH71_RS06700 (BSB_13220)	med	1307395..1308348 (-)	954	WP_014663517.1	transcriptional regulator Med	Regulator
AACH71_RS06705 (BSB_13230)	-	1308438..1308995 (-)	558	WP_014663516.1	hypothetical protein	-
AACH71_RS06710 (BSB_13240)	-	1309077..1309811 (-)	735	WP_040083462.1	hypothetical protein	-
AACH71_RS06715 (BSB_13250)	-	1310062..1310247 (+)	186	WP_003245236.1	DUF2929 domain-containing protein	-
AACH71_RS06720 (BSB_13260)	-	1310293..1310472 (-)	180	WP_003245356.1	YjzC family protein	-
AACH71_RS06725 (BSB_13270)	argF	1310558..1311517 (-)	960	WP_040083464.1	ornithine carbamoyltransferase	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35297.76 Da
• Isoelectric Point: 4.5025

>NTDB_id=108258 AACH71_RS06700 WP_014663517.1 1307395..1308348(-) (med) [Bacillus stercoris strain BST19]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDEDFQQRIAKLIKTYNKTGDLPKNE

Nucleotide

• Length: 954 bp

>NTDB_id=108258 AACH71_RS06700 WP_014663517.1 1307395..1308348(-) (med) [Bacillus stercoris strain BST19]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGACAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTACTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCAGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGACAATGTGACGAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACCAATCAGGTCGGTGTCATTGCTTCCTTTACGTGGCAG
CCTGAGGTTGACGGTTTTATCAAAGGAGCCAAGTATGAAAATCCAGATATAGAAGTAAACACGAAATATACGGATCATTG
GGATGATGATACGACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGTGCGGATGTTGTGTATCCTGCTGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGGCTTTATGCCATCGGCTACGTTACAGATCAATCGGACCTG
GGCGAGAATACCGTATTAACCAGCACGGTACAAAATGTGGACAAGGCCTATGAAATCATTGCTGAGCAATTCAACAAAGG
CACCCTTGAAGGCGGCGATCATTACTACGACCTGAATACGGGAGTAGTCGAGATGGGAACATTCAGCCCGCTCGTCGATG
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACGTACAACAAAACAGGCGATCTGCCAAAAAACGAGTAA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	99.369	100	0.994